Actinotignum timonense: CYJ17_0003750
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Entry
CYJ17_0003750 CDS
T09485
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
atim
Actinotignum timonense
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atim03400
]
CYJ17_0003750 (radA)
DNA repair and recombination proteins [BR:
atim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CYJ17_0003750 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Rubredoxin_2
DnaB_C
Lon_C
AAA_22
ChlI
AAA
Rad51
AAA_16
NACHT
AAA_30
TniB
GvpD_P-loop
ABC_tran
RecA
NTPase_1
AAA_5
nSTAND3
RuvB_N
AAA_24
AAA_29
PucR
AAA_14
RsgA_GTPase
PAXNEB
AAA_19
DAP3
MMR_HSR1
MCM
Motif
Other DBs
NCBI-ProteinID:
WOT00749
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Position
complement(910403..911779)
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AA seq
458 aa
AA seq
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MAKQPATVYECSECGWSTGKWMGRCARCGSWGTLDQHSPAAPSAAPAALAPTSPAQPITS
VPATAARKIPTGVSELDRVLGGGLVPGAVILLAGEPGVGKSTLLLDVAAKAARAAARLGR
APVLYISGEESASQVRLRGERIGAMDEHLLLASESDIGRALGHIENARPSLLIVDSVQTL
ADAEVAGTAGGPAQVRAVTAALVSVAKTHGLPVVLVGHVTKDGSIAGPRVLEHLVDVVCQ
FEGDKHSRLRLVRAVKNRYGATDEVGCFELTESGIVGLPDPSGLFLSARDHTVPGTCVSM
TLEGRRPMPVEVQGLVVPSSGRPQRTNSGVLSARVAMMVAVLQSRLGLSLDQKDIFVSTV
GGAQASEPAADAAIALALASAYMDLPLAPGVIAIGEVALTGELRPVTGLPQRLNEAARLG
FTLAIVPERTDSSKLPAGIRVQRCADIRQALEAVLPTG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaaccggcaaccgtgtacgaatgcagcgagtgcgggtggtccaccggcaaa
tggatgggccgctgcgcgcggtgcggctcgtggggcacgcttgatcaacacagtccggcc
gcaccctccgcggctccggccgctttagcaccaacttcaccggcgcaacccatcacctcg
gtgccggctaccgccgcgcggaaaattcccaccggggtatccgaattggatcgggtgctg
ggcggtggtttggttcccggcgcggtaattttgcttgccggggaaccgggggtgggcaaa
tctaccctgctcttggatgtggcggcgaaggccgcgcgggctgcggcgcgcttggggcgg
gcgccggtcctctatatttccggggaggaatcggcttcccaggtgcgcttgcgcggggag
cgcatcggggcgatggatgagcatctgcttcttgcttcggaaagtgatatcgggcgggcc
ctcgggcatattgaaaacgcccggccttcccttcttattgtggactcggtgcagaccttg
gccgatgctgaggtagcgggaactgcgggcgggccggcgcaggtgcgggccgtgaccgcg
gcgctcgtgagcgtggccaaaacgcacggactgccggtggtgctggtcgggcacgtcacg
aaagatggttccattgccgggccgcgcgtcctggaacacctggttgatgtggtctgccag
ttcgaaggggataaacactcgcggctgcgtttggtgcgcgcggtgaagaatcggtatggg
gctaccgatgaagtcgggtgttttgagctcaccgaaagcgggattgtgggcctacccgat
ccctcggggttgttcctttccgcccgggatcacaccgtgcccggcacctgtgtatcgatg
actctggaagggcggcggcccatgccggtggaagtccagggcctggtggttccttcgtcc
gggcggccgcagcgcaccaattccggggtgctttccgcgcgggtggccatgatggtcgcg
gtgctgcaatcacgcctgggcttgagcctggatcagaaagatatttttgtgtccacggtg
ggcggggcgcaggcaagcgaaccggccgcggatgccgcgattgctttggcgctggcctcg
gcctatatggatctgccgcttgctcccggggtgatcgccatcggggaagtggcccttacc
ggggaactccgcccggtcaccggcctcccccagcgcctgaacgaagctgcccggctcggt
ttcaccctcgccattgttcccgaacgcaccgatagctcgaagctccccgcggggattcgg
gtgcaacgctgcgcggatatccgccaggccctggaagcggtgcttcccaccgggtaa
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