Actinocatenispora thailandica: Athai_23440
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Entry
Athai_23440 CDS
T07045
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
atl
Actinocatenispora thailandica
Pathway
atl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Athai_23440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atl03019
]
Athai_23440
03400 DNA repair and recombination proteins [BR:
atl03400
]
Athai_23440
Enzymes [BR:
atl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Athai_23440
Messenger RNA biogenesis [BR:
atl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Athai_23440
DNA repair and recombination proteins [BR:
atl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Athai_23440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_16
AAA_30
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
BCJ34841
UniProt:
A0A7R7DNI9
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All DBs
Position
2601872..2603683
Genome browser
AA seq
603 aa
AA seq
DB search
MGNESSTAPAGAGDGAGRPAAEAVLRRLAGPDAVLRDDQWRAIEALVSPAADGTGRRVLL
VQRTGFGKSAVYFVATSLLRAAGAGPTVIVSPLLALMRNQIEAAAGAGIRAATINSANVT
QWQAIEADIAAGTVDVLLVSPERLNNPDFRDRILPELAATTGLLVVDEAHCVSDWGHDFR
PDYRRIATFLAGLEPHVPVLATTATANARVTADVAEQLGDVPSGPSGQPSAPGISNRTLV
LRGPLDRDSLRLGVLSLPSPAHRLAWLADHLAELPGSGIIYTLTVAAADEVADFLRARGH
TVAAYSGRTDPAERAAAEQDLLANRVKALVATSALGMGFDKPDLGFVVHLGAPASPIAYY
QQVGRAGRAVEHAEVLLLPGPEDEAIWRYFGSLAFPPEDQVRATLAALSTEVPTSTPVLE
SRVELRRSRLELMLKVLDVDGPCAGSGAAGWPPAPAGATTRPGTPGSPPPAPPSSRRCGT
IWVPAAAGCGSCATRSTTRTPPTAGAATPAAAGGTTRACPPRRWTRRSSTSAVPAYRWSR
GSCGRPVALRWASSTPARSTRPSWPRRAGRSAGCPTSVGGPGCARCCAPTPRTPRSTTRC
SPV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgagtcgagcaccgctcccgccggcgccggcgacggggcgggccggccggcc
gccgaggcggtgctgcggcggctggcggggccggacgcggtgctgcgggacgaccagtgg
cgcgcgatcgaggcgctcgtctcgccggccgccgacggcaccggccggcgggtgctgctg
gtgcagcgcaccgggttcggcaagtccgcggtgtacttcgtggcgacctcgctgctgcgg
gccgccggcgccgggccgaccgtgatcgtctcgccgctgctcgcgctgatgcgcaaccag
atcgaggcagctgccggcgccggcattcgggccgccacgatcaactccgccaacgtcacg
cagtggcaggcgatcgaggcggacatcgcggccggcacggtcgacgtgctgctggtcagc
ccggaacggctcaacaatccggactttcgcgaccggatactgccggagctggccgccacc
accggcctgctggtggtcgacgaggcgcactgcgtctcggactgggggcacgacttccgg
cccgactaccgccgcatcgccacgttcctcgccgggctcgaaccgcacgtaccggtgctc
gccacgaccgccaccgcgaacgcccgggtcaccgccgacgtggccgaacagctcggcgac
gtcccgagcgggccgtcggggcagccgtcggcgcccgggatctcgaaccggaccctggtg
ctgcgcggcccgctggatcgcgacagcctgcggctcggggtgctgtcactgccgagcccg
gcgcaccggctggcctggctcgccgatcacctggccgagctgcccggctccggcatcatc
tacacgctgaccgtcgccgccgccgacgaggtcgcggacttcctgcgcgcccgcgggcac
accgtcgccgcctactccgggcgtaccgacccggccgagcgggccgccgcggagcaggac
ctgctcgccaaccgggtgaaggcgctggtggcgacctcggcgctgggcatgggcttcgac
aagccggacctgggcttcgtggtgcacctgggcgccccggcctccccgatcgcgtactac
cagcaggtggggcgggccggccgggcggtcgagcacgccgaggtgctgctgctgcccggg
cccgaggacgaggcgatctggcggtacttcggctcgctcgcgttcccgccggaagaccag
gtacgggccaccctcgccgcgctgtcgaccgaggttccgacctcgaccccggtgctggag
tcgcgggtggaactgcgccgcagccggctggagctgatgctcaaggtgctcgacgtggac
gggccgtgcgccgggtccggggcggctggctggccaccggcgccggctggcgctacgaca
cggcccggtacgcccggatcgccgccgcccgcgccgccgagcagcaggcgatgcgggact
atctgggtaccggcggctgccggctgcggttcctgcgcgacacgctcgacgacccgtacg
ccaccgactgcgggcgctgcgacacctgccgcggccggtggtacgacccgggcgtgtcca
ccgcggcgctggacgcggcgcagcagcacctcggccgtcccggcgtaccggtggagccgc
ggaagctgtggccgaccggtggcgctgcgctgggcatcgagcacaccggcaagatcgacc
cggccgagctggccgcgccgggccgggcgctcggccggctgtccgacatcggttggggga
ccaggctgcgcgcgctgctgcgccccgacgccgcggacgccgagatcgacgacgaggtgt
tcgccggtgtga
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