Actinocatenispora thailandica: Athai_28690
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Entry
Athai_28690 CDS
T07045
Name
(GenBank) RNA polymerase sigma factor
Organism
atl
Actinocatenispora thailandica
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Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
BCJ35366
UniProt:
A0A7R7DPI3
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Position
3187369..3188514
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AA seq
381 aa
AA seq
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MNDSLLRELVPAVIAVLVRRGADFATAEDAVQEALIEAVRAWPRHPPREPKAWLVTVAWR
KFLDAARADAARRRREERVDDEPAPEPGAAGDDTLQLYFLCAHPSLSPASAVALTLRAVG
GLTTRQIAQAYLVPEATMAQRISRAKRTVSRVRFDQPGDLGTVLRVLYLVFNEGYSGDVD
LAAEAIRLTRQLAARTTHEEVAGLLALMLLHHARRPARTGADGQLIPLAEQDRGRWDTRL
IAEGIDVLQAALARDRLGEYQAQAAIAALHADAPTAADTDWVQIVEWYDELVALTGSPIV
RLNRAVAVGEADGPQAGLAALAELDEALPRYSAAAAYLHERAGEPAAAARCYAEAARAAS
TVPERDHLTRQAARLNTQLRS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgactcgctgctgcgggagctggtccccgcggtcatcgccgtcctcgtccggcgc
ggagcagacttcgcgacggccgaggacgcggtgcaggaggccctgatcgaggcggtacgg
gcctggccgcggcatccaccgcgggagccgaaggcgtggctggtcaccgtggcatggcgc
aagttcctcgacgcggcccgcgccgacgccgcccggcgccggcgcgaggaacgcgtcgac
gacgaaccggcgcccgagccgggcgcggcgggcgacgacacgctccagctgtacttcctg
tgcgcccacccgtcgctgagcccggcgtcggccgtggcgctgaccctgcgcgccgtcggt
gggctcaccacccggcagatcgcccaggcatacctggtgccggaggcgaccatggcgcag
cgcatcagccgggccaagcggaccgtgtcgcgcgtccggttcgatcagcccggcgacctg
ggcaccgtgctgcgagtgctgtacctggtgttcaacgaggggtactcgggcgacgtcgac
ctcgccgccgaggcgatccggctcacccgccagttggccgcgcgcaccacgcacgaggag
gtggccgggctgctcgcgttgatgctgctgcaccacgcgcggcgcccggcccgtaccggc
gcggacggccagctcatcccgctcgccgagcaggaccgcggccggtgggacacccggctg
atcgccgagggcatcgacgtgctgcaggccgcgctcgcccgcgaccggctcggcgagtac
caggcccaggcggcgatcgcggcgctgcacgccgacgcgccgaccgcggccgacaccgac
tgggtgcagatcgtcgagtggtacgacgagctcgtcgcgctcaccggcagcccgatcgtg
cggctcaaccgggccgtcgcggtgggcgaggcagacggcccgcaggccgggctggccgcc
ctggccgaactcgacgaggccctgccccggtactcggcggccgccgcctacctgcacgag
cgggccggtgagccggccgccgccgcccgctgctacgccgaggcggcacgcgccgcgtcc
accgtgcccgaacgcgaccacctgacccggcaggccgcccggctcaacacccagctgcgg
tcataa
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