Anaerolinea thermophila: ANT_02540
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Entry
ANT_02540 CDS
T01410
Symbol
holB
Name
(GenBank) putative DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
atm
Anaerolinea thermophila
Pathway
atm03030
DNA replication
atm03430
Mismatch repair
atm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ANT_02540 (holB)
03430 Mismatch repair
ANT_02540 (holB)
03440 Homologous recombination
ANT_02540 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atm03032
]
ANT_02540 (holB)
03400 DNA repair and recombination proteins [BR:
atm03400
]
ANT_02540 (holB)
Enzymes [BR:
atm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ANT_02540 (holB)
DNA replication proteins [BR:
atm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ANT_02540 (holB)
DNA repair and recombination proteins [BR:
atm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ANT_02540 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_5
Motif
Other DBs
NCBI-ProteinID:
BAJ62288
UniProt:
E8MZV3
LinkDB
All DBs
Position
281730..282755
Genome browser
AA seq
341 aa
AA seq
DB search
MTWEISGHDWAVDLLKGHIQRGEVRHAYLFSGAAGIGKRTLALRFAQALNCPTPLAPGEP
CRTCRVCRQIEQMSHVDLSVVQSEGEGMVLKVDQARELQQTLALLPRELPYRVALLLRFH
EANASAQNALLKTLEEPPARAILLITATSPEELLPTIVSRCEVLRLRPLAPEACAQVLIK
RGVPAEEAQWLAHLSGGRPGYALNLHAQPDLLEARRRTLEDLLHLLGAPRRERFAYAERL
TASRGKERERLLQTLPLWLSFWRDVMICASGSGLSLTHLDFAEQIQRVAEQVGLARAAFV
TRRLEEHLQRLESNPNMRLLVEMSLLEMPRLAEEVSAAPRE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacctgggagatttccggacatgattgggcggtggatttgctcaaagggcatatccag
cgcggtgaggtgcgtcatgcctatctcttcagcggcgcggcggggattggcaaacgcacg
ctggcactgcgctttgcccaggcgctgaattgccccaccccgctggctcccggtgaaccc
tgccgaacctgccgggtatgccgtcaaattgagcaaatgagccatgtggacttgagcgtg
gtgcagtctgagggggagggcatggtgctgaaggtggatcaagcccgcgaactgcagcag
acgcttgccctcctgccgcgtgaattgccctaccgtgtggcgttgctgttgcgctttcac
gaagccaatgccagcgcccagaatgctctgctgaaaacgctggaagaacccccggcgcgc
gccattctgctcatcaccgccacctcgcctgaggaacttctgcccaccatcgtctcgcgc
tgtgaggtgctgcgcctgcgtccgctggcgcccgaagcctgcgctcaggtgctgataaag
cgaggtgttcctgccgaagaggcgcagtggctggcgcacctttccggcggacgtcccggc
tatgccctcaatctacacgcccagcccgacttgctggaagcgcgcaggcgcactctggaa
gacctgttacacctgctgggcgcgccgcgccgcgagcgctttgcttacgccgagcggctc
accgcttcgcgcggcaaagaacgtgagcgtctgctccaaactctccctctgtggctgtcg
ttctggcgggatgtgatgatttgcgccagcgggagcggtttgtctcttactcatctggat
tttgccgaacaaatccaacgggttgccgagcaggtggggctggcgcgggccgccttcgtc
acccggcggctggaagaacatctccagcgcctggagagcaatcccaatatgcgtttgctg
gtggaaatgtctttgctggaaatgccgcggttggcggaagaagtcagcgccgctccccgg
gaatga
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