Anaerolinea thermophila: ANT_16100
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Entry
ANT_16100 CDS
T01410
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
atm
Anaerolinea thermophila
Pathway
atm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ANT_16100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atm03019
]
ANT_16100
Messenger RNA biogenesis [BR:
atm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ANT_16100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
Wzz
DUF3139
Motif
Other DBs
NCBI-ProteinID:
BAJ63636
UniProt:
E8N5C2
LinkDB
All DBs
Position
complement(1798168..1799706)
Genome browser
AA seq
512 aa
AA seq
DB search
MGQSGWVIIFVVLALEILLGIAVVYFLVQKYQQEYRKQQDAKADNIINQATEKARVIQLE
AKDKALKIQQEAELELSRRRQELAREEERLTKRRAELDHRLERLEQREQMLNKRQSAIDK
RANEIEKLYSDQMLELQRIAEMTKEQAREVLLQEVEKEARNDMARIIRQIETEARIEGEK
RAREIIADAIQRVASEHVSEVTTSVVSLPNDEMKGRIVGRNGRNIRTFEQLAGVDVIVDD
TPEAVTISCFDSVRREVARRALERLILDGRIHPAHIEKILNEEQRNVEKEIEEAGQQAAF
DANVAGLHPEILKMLGRLKFRTSYGQNQLAHAVEVSRLAAVIASELGADVEVCKAGALLH
DLGKAMDHNTEGTHAMLGAEFARRYGVHPKVVNCIASHHHEVEQESVEAVIVEAADAISG
ARPGARREDLEQYIKRLRALEEIANSFKGVSQSFAIQAGREVRIIVRPEDVDDLAATRMA
RDIAKKIEETMQYPGQIKVTVIRETRAIDYAK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggacagtctggatgggtgataatttttgtagtcctggcacttgaaattctacttgga
attgctgtggtatatttcctcgttcaaaaatatcaacaagaataccggaagcaacaggat
gctaaagccgataacatcattaatcaagccacagaaaaagcacgagtaattcaactcgaa
gccaaagataaggctctgaagatccaacaggaagcggaactggaactgagtcgcagacgt
caggaactggctcgtgaagaagagcggttaactaagcgaagagcggagttggatcatcgc
ctggagcgtcttgaacaacgtgaacaaatgttaaataagcgacagagtgctattgacaaa
cgggcaaatgaaattgaaaaactctacagcgaccagatgcttgaacttcaacgcattgct
gaaatgaccaaagagcaggctcgagaagttctcttacaggaagtggaaaaggaagcccgc
aatgacatggcacgcataattcggcaaattgagactgaagcgcgtattgagggagaaaaa
cgtgcacgggaaattattgccgatgcgattcagcgggtggcttcagaacatgtgtctgag
gtgaccacttctgttgtttcgcttcctaatgatgaaatgaagggaagaattgttggtaga
aacggaaggaacattcgtacctttgaacaactcgcaggtgtggatgtgattgttgacgac
actcccgaagccgtcacaatttcatgctttgactcggtgagacgtgaggttgctcggcgg
gcgctggaacgcctgattctcgatggaagaatccatcccgcgcatatcgaaaaaatcctc
aatgaagaacaacggaatgtggaaaaagaaattgaagaggctggtcagcaagccgccttt
gatgcgaatgtcgctggtttacacccagaaattcttaagatgctgggcagattaaaattc
cgcacttcttatggacagaatcaacttgcccatgcagtggaagtttcacgtttggcggca
gtcattgcctcagagttaggtgctgatgtagaagtatgtaaagccggcgcgcttcttcat
gatttggggaaggctatggatcacaacactgagggtactcatgccatgttgggcgctgaa
tttgcccgtcggtacggtgttcatcccaaggttgtgaattgtattgcgtcccatcatcat
gaagttgagcaagaatcggttgaggcggtaattgttgaagcggcagatgcaatttctggc
gctcgtcccggtgcgagacgtgaagatttggaacagtatattaagcgcttgcgtgctttg
gaagaaattgcaaattctttcaaaggcgttagtcagtcatttgcgattcaggcgggacga
gaagtcagaatcattgttcgtcctgaagatgtagatgacctggcggcaacacgaatggcg
cgagatattgccaagaagattgaagagaccatgcaatatcctggacaaattaaggtcaca
gtgattcgggaaacgcgagccatagattacgcaaaataa
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integrated database retrieval system
