Amborella trichopoda: 105420412
Help
Entry
105420412 CDS
T02990
Name
(RefSeq) SKP1-like protein 1B
KO
K03094
S-phase kinase-associated protein 1
Organism
atr
Amborella trichopoda
Pathway
atr03083
Polycomb repressive complex
atr04120
Ubiquitin mediated proteolysis
atr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105420412
04120 Ubiquitin mediated proteolysis
105420412
09126 Chromosome
03083 Polycomb repressive complex
105420412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
105420412
04121 Ubiquitin system [BR:
atr04121
]
105420412
03036 Chromosome and associated proteins [BR:
atr03036
]
105420412
Membrane trafficking [BR:
atr04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
105420412
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Adaptor protein
105420412
Cul7 complex
105420412
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
105420412
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
105420412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
105420412
NCBI-ProteinID:
XP_011622217
LinkDB
All DBs
Position
Unknown
AA seq
209 aa
AA seq
DB search
MNEEKKVILRSSEAKAFEVDECVAMESRMIKGIIEEGITEFGIPLPKISSKILAMIIDYC
KFHVESKMKLRSLTMDASEKKLEKFSDEMAEMEGTRKKRKVQIDKEEMRQKFAVDRAKKL
QKSRAQRALKAINVWDSKFVNVDTDTLYDLIVAANFLDIPDLMDLACQTAANMIKGKTPE
EIRKTFNIENDFTAEEEEAMRDDREGLFD
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggaaaagaaggtgatcctgaggagctcagaagccaaggccttcgaggtcgat
gagtgcgtggctatggaatcacggatgatcaagggcatcatcgaggaagggattacggag
tttgggatccctctccccaagatttcaagcaaaatccttgccatgatcatcgattattgt
aaatttcacgttgaatctaaaatgaaactcaggtccttgaccatggacgcttctgaaaag
aagttggagaagttttctgatgaaatggctgaaatggaaggaacacggaagaaaaggaag
gtacagattgataaagaggagatgcgccagaaatttgcagtggatagggccaagaagctt
caaaagagcagggctcagagggctttgaaggcgatcaatgtttgggattcaaaatttgtc
aatgttgatactgatacactttatgatctcattgtggctgcgaattttcttgatatacca
gatttgatggatctggcttgccaaactgcggcgaatatgattaaggggaagactcctgaa
gagattcgaaagacgttcaacattgagaatgatttcactgcagaggaagaggaagcgatg
agggatgacagagagggcctttttgactaa
DBGET
integrated database retrieval system