Amborella trichopoda: 105421309
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Entry
105421309 CDS
T02990
Name
(RefSeq) LOW QUALITY PROTEIN: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
105421309
Enzymes [BR:
atr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
105421309
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105421309
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Hydrolase_6
Motif
Other DBs
NCBI-GeneID:
105421309
NCBI-ProteinID:
XP_011626553
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All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MIDITNQLKFMDMEISEGVLICQGGDKGMTSRAAAIERDCSINGVTFFYAMIKDHGVKNI
LPVWCMEATPSLACANTCVFCXRHHTNPVGKSWQWKLDDPLEIVNAAIDEHTETIKQMKG
VPGVTTDRLFEGLSPRHCALSLVGEPIMYPEINALIDELHKQRISTFLLTNAQFPERIRL
LKPITQLHVSVDAATKKSLKAIDRPHFGDFWEXFADSLRALREKEQRTVYHLTLVKGWNA
EDIDAYYELFSIGKPDFVEIKGVTYCGSFATSKLTMENVPWYLDVKAFSEVLASKSGSEY
EIASEHTHSCCVLLARADKFRVNGQWFTWIDYERFHDLVISFFLSLSHTHNKQLSGVPFG
GKDYMAATPSWAVYGAEEGGFDPDQARYKKERRHGSCNGQNRQPVS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgattgatatcacaaatcaattgaaattcatggacatggagatttcagagggtgttctg
atttgccaaggtggagacaaagggatgacttcgagggcggcagccattgagagagattgc
tctattaatggtgttactttcttttatgcgatgataaaggaccacggtgtaaagaatatt
ttgcctgtatggtgcatggaggcaacccccagcctagcttgtgctaatacatgtgtgttt
tgttgaaggcaccataccaatcctgttgggaagagttggcagtggaagttagatgatcct
ctagaaattgtaaatgctgcaatcgatgagcacacagagacgattaagcaaatgaaagga
gttccaggagtgactacggaccgtctgtttgaaggtctttcacctagacattgtgccctt
tcccttgttggtgagcctatcatgtacccagagatcaatgccctcattgatgaactgcac
aagcaacggatttctacatttcttttaacaaatgcccagtttccagaaagaattagactt
cttaaacccattacacagctgcatgtgagtgtagatgctgcaactaaaaagagcttgaag
gcaatagacagacctcactttggggatttctgggaatgattcgctgattcattgagggca
ctccgcgagaaggagcagagaactgtgtaccacttgactttagtcaaaggatggaatgcc
gaggacatagatgcatactatgagttgttcagcattggaaagccagactttgttgaaata
aagggtgttacctactgtggctcgtttgcaacttccaaattgacaatggagaatgtacca
tggtatttggatgtgaaagccttctctgaggttttggcctcaaagagtggcagcgaatat
gaaattgcctccgaacatacccattcttgttgtgtactcctggcaagagctgacaagttc
agggttaatggccaatggttcacttggattgactatgaaaggttccatgacttggtaatc
tctttctttctctctctctcacacacacacaacaaacagctttcaggtgtgccctttggt
ggtaaggattacatggcggccacaccctcctgggctgtttatggtgctgaggaaggtggg
tttgatccagatcaggcccgttataagaaagagcgacgacatggaagttgtaatggtcaa
aaccgtcagcctgtaagctaa
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