Amborella trichopoda: 18421576
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Entry
18421576 CDS
T02990
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
atr
Amborella trichopoda
Pathway
atr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
18421576
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atr01002
]
18421576
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18421576
Enzymes [BR:
atr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
18421576
Peptidases and inhibitors [BR:
atr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
18421576
Ubiquitin system [BR:
atr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
18421576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
18421576
NCBI-ProteinID:
XP_011626363
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MTMMTPPPLDQEDDEMLVPHSEFNDNAQPMEGVVVAQGETVSTAENQPVEDPPTSRFTWT
IENFSRLNSKKHYSDIFVVGGYKWRVLIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQF
CLSVVNQLNSKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPNKGYLVNDTVVVEAEVA
VRRVVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSG
SIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKED
MKRALEEQYGGEEELPQNPGFNNTPFKFTKYSNAYMLVYIRESDKEKVICNVDEKDIAEH
LRIRLKKEQEEKEHKKKEKAEAHLYTIIKVAKNEDLAEQIGKDIYFDLVDHDKVRSFRIQ
KQMPFSVFKEEVAKEFGVPVQFQRFWLWAKRQNHTYRPNRPLTHQEETQSVGQLREVSNK
AHNAELRLFLEVEFGPDLRPILPPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSSGKPI
EILTKLNEMAGFPPNEEIELYEEIKFEPNVMCEHIDKKLAFRASQLEDGDIICFQKALSA
ENDERFRYPDVPSFLDYVHNRQVVHFRSLERPKEDDFCLELSKLYTYDDVVERVARQLGL
DDPTKIRLTSHNCYSQQPKPQPIKYRGVERLSDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHSTKDEVVSHSIRLPKQSTVGDVINDLKTKVELSNSSAELRLLEVFYHKIYK
IFPLGEKIENINDQYWTLRAEEIPEEEKNLSPHDRLIHVYHFTKDTTQNQMQVQNFGEPF
FLVIREGETLAEVKVRIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDVVSTRFQRRDVY
GAWEQYLGLEHSDSAPKRSYTANQNRHTFEKPVKIYN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgacacctccaccattagaccaggaggatgacgagatgctggttcctcat
tcagagttcaacgataatgctcaaccaatggaaggtgtagtagtggcgcagggggaaact
gttagcacggccgagaaccagcctgttgaggatcccccaacttctcgattcacttggacg
atcgagaatttctcaaggctcaacagcaaaaagcactactccgacatatttgtagtcggg
ggttacaaatggcgggtgctgatattccccaaagggaataatgtggaccacttgtcgatg
tacttggatgtggcggattctgctactcttccttatgggtggagtcgatatgcacagttc
tgcttgtcggtcgtaaaccagcttaatagcaagtacacaataagaaaagacacacaacac
caatttaatgcccgagaaagtgattggggcttcacatcatttatgcctctcagtgacctc
tatgacccgaacaaagggtatcttgttaatgatacagtagtagtggaagcagaagttgct
gtccgtagagtcgttgattattggacgtatgactctaagaaagaaactggttatgttggg
ctcaaaaaccagggagcaacttgttacatgaattctcttcttcagactctctaccatatt
ccatacttcagaaaggcggtttaccatatgcccaccactgaaaatgatatgccatctggg
agcatcccactagcgctacagagcttgttctacaaactacagtatagtgacaatagtgtt
gccacaaaagagctgactaaatctttcgggtgggacacatatgattctttcatgcagcat
gatgtgcaggagcttaatagggttctttgtgaaaaactggaggacaagatgaagggtaca
gtggtcgagggtacgatacagcaattatttgaagggcaccacatgaactacattgagtgc
attaatgtagattacaaatcgacaagaaaggagtcattttatgacctccagcttgatgtc
aaaggctgtcgtgatgtatatgcttcttttgacaagtatgtggaagtcgaacgtcttgaa
ggtgacaacaagtaccatgccgagcaacatggtttgcaggatgctcggaagggtgtgctt
ttcattgatttccctcctgtattgcaacttcagctaaagcgctttgagtacgatttcatg
agggatacaatggttaagataaatgacaggtacgagttcccattacaattggaccttgat
cgagagaatgggaaatatctttctccagatgcagacaggagtgtccggaacctttatacg
ctgcacagtgttctagttcacagtggtggtgtacacggtggacattattatgctttcatc
aggccaaccctctctgaccaatggttcaagtttgacgatgagcgtgtgacaaaagaagat
atgaagagggcattagaggagcagtatggtggtgaggaggagttgccacaaaatcctggg
tttaataatacaccattcaaatttacaaaatattcaaatgcgtacatgcttgtgtacatc
cgagaaagtgacaaggagaaagtcatttgtaatgtggatgagaaggacattgctgaacat
cttaggataagattgaagaaagaacaagaagagaaagagcacaagaagaaggagaaagca
gaggcacacctttataccatcataaaggttgcaaaaaatgaggatctagcagaacaaata
ggaaaggatatatattttgatcttgtggaccacgacaaagttcgaagtttccgtattcag
aagcaaatgcctttcagtgttttcaaggaagaggtcgcaaaggagtttggcgtaccagtg
caatttcaacggttttggctgtgggctaagcgtcaaaaccatacctatcgccccaacagg
ccattgacccatcaagaagaaacacaatcggttgggcagttgagggaggtatcaaacaag
gctcataatgcagaattgaggctcttcctggaagtggaatttggacctgatctacgtccc
atccttccccctgagaagactaaagaagatatactactatttttcaaactttatgaccca
gaaaaagaagagctacgctatgttggaagactttttgtgaagtcctcgggaaagccaatt
gagattttgacaaaactgaatgaaatggctggtttccctccgaatgaagaaatcgaactt
tatgaggaaataaagtttgaaccgaatgtcatgtgtgagcatattgacaagaagcttgca
tttcgagcgagccagcttgaagatggggatattatatgcttccagaaagccttgtctgca
gaaaatgatgaacgtttccgttatccagatgtaccttctttcttggattatgtacataat
cggcaggttgtccattttcgttcattggagagaccaaaggaggatgacttctgtctagaa
ctatcgaagctgtacacatatgatgatgttgtggaaagggttgctcgtcaacttggtttg
gatgatccaacaaaaatacggctcacatctcacaactgttattcccagcaacctaaaccc
caaccaataaagtatcggggcgtggagcgtctatcggatatgctggttcactataaccag
acttctgatatattgtattatgaagtgctggatattccactgccagagttgcagggtttg
aaaaccctaaaagttgcatttcatcattcaaccaaagatgaagttgttagccatagtatc
cggctacccaagcagagcactgttggggatgtcatcaatgatttgaaaactaaggttgag
ctgtctaactctagtgctgagcttcgattgcttgaggttttctatcacaagatttacaag
atatttcctcttggtgagaagattgagaacataaatgatcagtactggacgttacgtgct
gaggagatcccggaagaagagaaaaacctcagccctcatgatcggttaatccatgtttac
cactttaccaaggataccacgcaaaatcagatgcaggttcagaattttggggaacccttc
tttttagtcattcgtgaaggggagactttagctgaggttaaggtacggatccagaagaag
ctacaggttccagacgaggagttctctaagtggaagttcgcatttttgtcattgggtcgc
cctgaataccttcaggattctgatgttgtatcaacccgttttcagagaagagatgtttat
ggagcttgggagcagtacctcgggttggagcattcagatagtgccccaaaaaggtcctac
acggccaatcagaaccgtcacacttttgagaagccagttaaaatctacaactag
DBGET
integrated database retrieval system
