Amborella trichopoda: 18425036
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Entry
18425036 CDS
T02990
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
atr
Amborella trichopoda
Pathway
atr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18425036
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atr01002
]
18425036
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18425036
Enzymes [BR:
atr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
18425036
Peptidases and inhibitors [BR:
atr01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
18425036
Ubiquitin system [BR:
atr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
18425036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
ATG16
Endotoxin_N
Motif
Other DBs
NCBI-GeneID:
18425036
NCBI-ProteinID:
XP_011629213
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MSWCTIESDPGVFTELIQQMQVKGLQVEELYSLDLDSLNCLRPVYGLIFLFKWRPGDTDQ
RLVIKDHSPNLFFASQVINNACATQAILAILLNCPEIDIGPELSMLKEFTKNFPPELKGL
AINNSEAIRTAHNSFARPEPFVADDQRPAEKDDDVYHFISYLPVDGVLYELDGLKEGPIS
LGKCPGGRDGLEWLQMVQPVIQERIEKYSKNEIRFNLMAIIKNRKEIYTTEVKELQKRRE
YITQQLAAAQPERSGGRTDLSTQTGVIEGLKKSLADVTLGIESVTEKILMEEEKFKKWKT
ENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKARQKTSTR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtgtacaattgagtctgatccaggtgtttttactgaactaattcagcaaatg
caagtaaaagggttgcaggttgaagagctttactccttagatctggattccctcaactgt
cttaggcctgtgtatggtctgatattccttttcaaatggaggccaggagatacagatcaa
agacttgtaattaaagatcacagcccaaatttattttttgccagccaggtaatcaacaat
gcttgtgcaacccaggcaattcttgctatcttactgaactgcccagaaattgacattggt
cctgagctctcgatgttaaaggaatttacgaagaatttcccgcctgagctaaaaggattg
gccattaacaatagcgaagcaattcgcacagctcacaacagttttgctcggcctgagccc
tttgtggccgatgaccaaagacctgctgaaaaagatgacgatgtgtaccatttcataagc
tatctgcctgttgatggggtcctttatgaactcgatggattaaaagaaggccccattagc
cttggaaagtgccctggaggaagagatggtttggagtggcttcaaatggttcaaccagtg
attcaagaacgcatagagaagtattcaaaaaatgagattaggtttaaccttatggctatc
ataaagaataggaaagagatttacacaaccgaagttaaagagctccaaaagaggagagag
tatatcactcagcagcttgcggctgctcaaccggagagatcgggggggagaacagatttg
agtacccaaactggtgtgattgaagggctaaagaaatctcttgcagatgtgaccttgggt
atcgagagtgtgactgagaagatattgatggaggaggagaagttcaagaagtggaagact
gaaaacataaggaggaagcataattacattcccttcctgttcaatttcttgaagatattg
gctgagaagaagcagttaaagcctcttattgagaaggcaaggcagaaaacgagcacaaga
tga
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