KEGG   Amborella trichopoda: 18425223
Entry
18425223          CDS       T02990                                 
Name
(RefSeq) uncharacterized protein LOC18425223 isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
atr  Amborella trichopoda
Pathway
atr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    18425223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atr03036]
    18425223
   03400 DNA repair and recombination proteins [BR:atr03400]
    18425223
Chromosome and associated proteins [BR:atr03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    18425223
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     18425223
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 18425223
NCBI-ProteinID: XP_006829852
UniProt: W1NNK4
LinkDB
Position
Unknown
AA seq 588 aa
MKGRGSEKIRNLGEEVRPARVHRKRRKRDEKEIEERQRSEKGNDERERNGGVLLPSMRNS
YILKENGVVVSRYFELKTKGSENKLSVFTAAEKAGCPVCPLYSEKQNPHLRLGEYCNMNM
GKRVSSEVMIRSLGKEGKAAMRKRDERKIKERERSEKGNDETERNEGGLLPAKRKSYVLK
ENGVVVSPYFEPNIKHSEPKQKKSAVLQHLRQKEDCGVDMEKMASSKTKKKSSWKIGNLR
EEAKAARVPPNMRKRDGRDIKEKKRSETENDDGVMNDMVLLPLMSKSYIVKTNGVVVSSY
FEPKKVDCSVDMEQRVSSQTKKKSSRKIGNLGKEVKAARVPPKMRKRDGRDIKAKKSSEK
GNDDGVMNDKVLLPLMSKSYIVKTNGVVVSRYFEPKVKNSKPKQKKLAIKKSEQKQKKSV
VLSRAEMLKEAYKRKSADNNWVPPPSPFGLMQEKYYNDPWKVLVICMFLNKTSGNQAREV
LSDFLKLCPDAKATTEIATEEITRVTHSLGLQRKRAEILQRFSREYLDDHWTHVTQLYGI
GKYAADAYAIFCTGMWKDVRPDDHKLNDYWGFLWELERASNEQVQDCL
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgaagggaagaggttcagagaagatcagaaacttgggcgaagaggtgaggcctgctagg
gttcatcgaaagaggaggaagagggatgaaaaggagattgaagagagacaaaggagtgag
aagggtaatgatgagagagaaaggaatggtggggttttattgccgtcaatgaggaacagt
tacatattgaaagagaacggggtggtagtttctcgttactttgaactaaaaaccaagggt
tcagaaaataagttatcagttttcacagcggccgagaaggctggctgccctgtttgccct
ctgtattccgagaagcagaacccacatctgcgtctaggggaatattgtaatatgaatatg
ggaaagagggtttcttctgaggtgatgatcagaagcttgggcaaagaggggaaggccgct
atgaggaagagagatgaaaggaagattaaagagagggaaaggagtgagaaggggaatgat
gagacagaaaggaatgaagggggattattaccagcaaaacggaaaagttacgtattgaag
gagaatggggtggtagtttctccttactttgaaccaaatatcaagcactcagaaccaaaa
caaaagaagtcagcagttctccaacatttgcgtcaaaaggaagattgcggtgtggatatg
gaaaagatggcttcttctaagacgaagaaaaaaagttcatggaagattggaaacttacgg
gaagaggcgaaggctgctagggttcctccaaatatgaggaagagagatggaagggatatt
aaagagaaaaaaaggagtgaaacagagaatgatgatggagtaatgaatgatatggtgtta
ctgccattaatgtcgaaaagttacatagtgaagacgaacggtgttgtagtttctagttac
tttgaaccaaaaaaggtagattgcagtgtggatatggaacagagggtttcttctcaaaca
aagaaaaaaagttcacggaagatcggaaacttagggaaagaggtgaaggctgctagggtt
cctccaaagatgaggaagagagatggaagggatattaaagcgaaaaaaagtagtgaaaaa
gggaatgatgatggagtaatgaatgataaggtgttactgccattaatgtcgaaaagttac
atagtgaagacgaacggtgttgtagtttctaggtactttgaaccaaaggtcaagaattca
aagccaaaacaaaagaagttagctatcaagaagtcggagcaaaaacaaaagaagtcagta
gttctctcaagggccgagatgcttaaagaggcatataaacgcaagtccgctgataacaat
tgggttcccccgccatcaccattcggcctcatgcaggagaaatattacaatgatccgtgg
aaagtcttggttatttgtatgtttctgaataaaacgagcggaaatcaggcaagagaggtt
ctttctgattttctcaagctatgtcctgatgcaaaggcaaccaccgagattgctactgag
gaaataaccagggtgacacattccctaggtcttcaaaggaaacgagctgagatacttcaa
cgcttctctcgagaatatttggatgatcactggacacatgtcacccagctttatggcatt
ggcaagtatgcagctgatgcatatgcgatattttgcacggggatgtggaaggatgttcgc
cctgatgaccacaagttaaatgactactggggtttcctttgggaattggagagggcatca
aacgaacaagttcaagactgtttgtaa

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