Amborella trichopoda: 18426138
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Entry
18426138 CDS
T02990
Name
(RefSeq) heat stress transcription factor B-4b isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18426138
Transcription factors [BR:
atr03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
18426138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
PRIMA1
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
18426138
NCBI-ProteinID:
XP_020517998
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MGLVVEGVGEMLVSLENQKAVPAPFLTKTYQLVNDPCTDHIVSWGEDDTSFVVWRPPEFA
RDLLPNYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANEFFKRGEMHLLCEIHRRKATHPP
PPPPPPPPPLTLSHLNTFSLYTKPFESDELQTYPESPLSSPNTTDLATALAEDNKRLRRS
NSLLLSELSHMRRLYNGIIYFLQNHVKPVPHPKFSDPPLITQQRLHDSIGFEDPLKETEE
RERNLGEEEEDPINTVKLFGVPLHGRKRLRSEVLEHEDHRLEFHVH
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggtttagtggtagaaggtgttggagagatgttggtctcattggaaaaccagaaggca
gttcctgccccttttctcactaaaacttatcaattggtgaatgatccttgcactgatcac
attgtttcttggggagaagatgacacaagttttgtggtgtggaggccacctgagtttgca
agggatttgctccctaattacttcaagcacaacaatttctcaagctttgttaggcagctc
aacacctatggattcaggaaggtggttcctgatcgatgggaatttgcaaatgagttcttc
aaaagaggagaaatgcacctcttatgtgaaatccacagaagaaaagccacacaccctccc
cccccgcctcctcctcctcctcctcctctcactctctctcatctaaacactttctctctc
tacaccaaaccctttgaatctgatgagctccaaacctaccctgaatctcctctctcttct
ccaaacacaactgatttggcaactgccttagcagaagataacaagaggctgagaaggagc
aactctttgcttttatctgagctctctcatatgagaaggctctacaatggcatcatctat
ttccttcaaaaccatgtaaaaccagtgccccatcccaagttctcagacccaccattgata
acccagcaaagactccatgattcaataggttttgaggatcctctcaaggaaacagaggag
agagaaaggaacttaggagaagaagaagaagaccccatcaacactgttaagctttttggg
gtgccacttcatggaaggaagagattgagatcagaggtgctggagcatgaagaccatagg
ctggagtttcatgtacattaa
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