Amborella trichopoda: 18443232
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Entry
18443232 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18443232
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
atr
Amborella trichopoda
Pathway
atr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
18443232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18443232
Enzymes [BR:
atr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
18443232
DNA repair and recombination proteins [BR:
atr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
18443232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adenine_glyco
Retinal
Motif
Other DBs
NCBI-GeneID:
18443232
NCBI-ProteinID:
XP_006853486
UniProt:
U5D3L2
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MSVKVESVAMDAGTLDVDSRRVLQPACNRVPTQVHQNNNLKKKSTTKPPTSPKPPQSPSS
PTSTLSPLSKYPTPPRPQHKRSPSLESTPISPTSKPSNHDQKEEHHPQLFVPKASFGLAV
GRKKLRNLGDIAEVPGSIAAARREEAKQIKAQRKQKIAHYGRAKKAGVAPPAVVAEAVAV
QEQRRCSFITANSDPVYVVYHDEEWGVPVHDDRMLFELLVLSGAQVGLDWTTMLKKRETF
RATFCAFEAEAVSQLSERQMASISAQCGLDLTKVRGAVDNAKVILQIKREFGSLEQYIWG
FVSKKPIITEYKSARKIPVKTSKSESVSKDMVKRGFRSVGPTVIHSFMQAAGLTNDHLLS
CPRHPHHNTPSSSS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaaaggtggagagcgtcgccatggacgctggtacactcgacgtcgactcccgg
cgcgtgttgcagcccgcctgcaaccgcgtgcccacccaagtgcaccagaacaacaatctt
aagaagaaatccaccaccaagccaccaacttcccctaaaccccctcagtccccgtcttcg
cccacttccactctctctcctctctccaaataccccacccctcctcggccccaacacaag
cgctctccctctctggaatccactcccatttcaccgacctcaaagccctcaaaccatgac
cagaaggaagagcaccacccacaattgtttgttccgaaggcctctttcggtttggcagtc
ggtcgcaagaaattgaggaatttgggagacattgcagaggtgcccggtagcatcgctgct
gcaaggagagaggaagccaagcaaataaaggcgcagaggaagcaaaagatcgcgcattat
gggcgagccaaaaaggccggggtggctcctcctgcggtggttgccgaggctgttgcggtg
caggaacagaggaggtgtagctttattactgccaattctgaccctgtatatgttgtttac
catgacgaggagtggggagttcccgtccacgatgacaggatgttattcgagcttctagtg
ctgagtggagctcaggtgggcttggattggactaccatgctcaagaaacgcgagaccttc
agggccacattctgtgcgtttgaggctgaagcagtatcacaattgagcgagaggcagatg
gcttcaataagtgctcaatgcggactggacctcaccaaggttcgaggagccgtcgataac
gccaaagtaattttacagataaaaagagagttcgggagtttggagcagtacatttggggg
ttcgttagcaagaagccgatcataacagagtacaaatcggcgaggaaaatccccgttaaa
acgtcgaaatcagagagcgttagcaaagacatggtgaaaagagggttcaggtctgtgggt
cccaccgtcatccactctttcatgcaagcggccggcctcaccaatgaccacctcctctcc
tgcccacgtcacccccaccataacacaccctcctcctcttcataa
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