Amborella trichopoda: 18444293
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Entry
18444293 CDS
T02990
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18444293
Membrane trafficking [BR:
atr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
18444293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
18444293
NCBI-ProteinID:
XP_006854531
UniProt:
U5D6K6
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MSGPPEEKLDGTNSLLDRMLLDEIAPVVMVLRTQLVEEACQKNNLTLIQMLQPFSVFGNI
DVPVRTVNDQPYRLRTFKLRLVYASDICQPNIEDSEKHLKKVVSDANEKALNDIQDDSPK
LEMTVPMADPEYMSPWFRVFNKALLHTVSFSDHEAFDHPVACLIVVSTKDEQPINKFVDL
FNTDQLPSLLNDGAMDPKILKYYLLIHDSQDGSSNRANELLAEMRSTFGPNDCRMLCINS
YKEGDEQRNDNPWSRVADTSGGQDIGCFLNIDDVDEIKDLMLDLSSKHIIPYMEQKIRSL
NQQVSTTRKGFRNQIKNLWWRKGKEDTADALNGPMYTFSSIESQIRVLGDYAFILRDYEL
SLSSYRLLSTDYKLDKAWRRYAGAQEMIGLSLFMLDQSGKEAEYYMENAFSTYLKMGSSG
QRNATRCGLWWVEILKVKGQYKEAATVYFRISTEEPSLHAAVMFEQASYCYLRSTPPMLR
KYGFHLILAGNRYNICDQRKHAVRAYRSALPVYKEQAWSYISDHVHFNIGRWYALLGMSN
AAIQHMLEVLACNHQSPTTQEALLGDFLQIVQKLGKKYDALRLRLPVINVASLKVFFEDH
RTFASSAAALVNEHVWRSLEEDLVPSVNPSGANWLYSLPKSSRKNNDSHICVAGEPIKVD
LEFKNPLQIPIVVSCVRLICKFSPISSTGEYDLDCAQSVNDENGGRSDTGSCDAMEVSNR
ESNDDCSSFISSEVDFTLEGDETMMVQLKVSPKMEGILQIIGVRWTLSGSVVGYLYFDSH
LAKKNCSKGRIAASKKTSKNKLKFTVIKSLPKLEARIHQLPLMAYSGDLQRIILEVSNHS
DSSVKNMKLKISHPRFVVPGRLEDLDMEFPGCLEKHISHDIHDMQDNAMDKLKGLSSFPK
DAGIQGGTTLLWPLWLHPVVPGNISLNMSIYYEMVTPSEHMNYRILRMRYDLEVLPSLDV
SVQITPSPSKLQEFLVRMDIVNRSNSKNFQLRQVSSVGNSWHLSELLPTPLGDQQQDERT
LKQETIYRSSSNCPRQLLAVGQGLSQFFKLMEVSKTSRLKGALERQSSLSLDISSISKSE
IDVSSMPLSEFHIQEIWHQEKQSAQEQGRTVDLVLISQWEKTSPEPEQQSGSQQLFVHYL
CHCSADMQSPIQWQMDGPRIVTHDFSDSFCEIGFQLTIRNSSDYIASVSINTSDDIPFPS
QQSDPSQTSHVGWHDISLSNGGKVPSDIQGQRNTSTRTSVDSSLPFLWCASSSTKIKLEP
MSSMVVPVRICVMAPGTYDLSNYTINWKLRFGTEENSVSGLLGRSWGTSPGHPFYLTVLQ
SS
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaccaccagaagagaagttagatgggactaattctctattggatagaatgcta
ttggatgagatagcccctgttgtcatggtgcttcgaacccaacttgtggaagaagcatgt
caaaagaacaacttgactcttattcagatgctacaaccattttcagttttcggaaatatt
gatgttccagtacgtactgtgaatgatcagccctatcgtctacgaactttcaaattacgt
ttggtttatgcttctgacatctgtcaaccgaatattgaggattcagaaaagcatttgaag
aaggttgtcagtgatgcaaacgagaaggctttaaatgacattcaagatgattctccaaaa
cttgaaatgacagtaccaatggcagatccagaatatatgtcaccatggtttcgggtcttc
aataaggcacttttacatactgtatccttttcagaccatgaagcttttgatcacccagta
gcctgcttaattgtagtctctactaaggatgaacagccaatcaacaaatttgtagacctt
ttcaatactgaccagttaccttcattgctaaatgatggtgcaatggatccgaaaatactg
aagtattatttgttaatacatgacagtcaggatggtagttcaaatagggcgaatgagctt
ttagcagaaatgaggagtacatttggcccaaatgactgtagaatgttgtgcatcaattca
tacaaggaaggggatgagcaaagaaatgacaatccgtggagtcgtgtagctgatacctct
ggggggcaagacattggctgttttcttaacattgatgatgttgatgagataaaagatctg
atgctggatctctcttccaaacacatcatcccttacatggaacagaaaatacgctcactc
aatcagcaggtttctacaacgaggaagggatttagaaaccaaataaagaacttgtggtgg
aggaaagggaaagaagacactgctgatgccctgaatggccctatgtatacttttagttct
atagagtcgcaaatcagagtcttgggcgactatgccttcattttgagagattatgagctt
tctttgtcaagttatcggttgctttccactgattataagcttgacaaggcatggaggcgt
tatgctggtgcacaggaaatgattggtctttcactatttatgctggatcagtctggaaag
gaggctgaatactacatggaaaatgctttcagcacgtatttgaaaatgggttcctctggt
cagagaaatgctacaagatgtggtctttggtgggtagaaatacttaaagtgaagggacaa
tataaggaagcagcaacagtttatttccgtatttccaccgaggaacctagtctccatgcg
gctgttatgtttgagcaggcatcttattgctatctgcgctctactccacctatgttgcgg
aagtatgggtttcatctcattcttgctggtaatcgctataacatctgtgaccagagaaaa
cacgctgttagggcatacagaagtgctcttcctgtgtataaggagcaggcctggagttat
ataagcgaccatgttcattttaatattggaaggtggtacgcacttcttgggatgtctaat
gcggcaatccagcatatgttggaagttcttgcttgtaaccatcagtctccaacaacacaa
gaagctttactgggagacttccttcaaattgttcagaagttgggaaagaagtatgacgca
cttagactgcgattacctgttatcaatgtcgcctctctcaaagtcttctttgaggatcat
aggacttttgcatcttcagctgctgctcttgtcaatgaacatgtgtggcggtctttggag
gaggatttggttccatctgtcaatcctagtggggcaaattggctttattcactacctaag
tcttccagaaaaaataatgactcccatatttgtgtagcaggagagccaataaaagttgat
cttgagttcaaaaatcctcttcaaatcccaattgttgtatcgtgtgttcgactaatatgc
aaattttccccaatatccagcacaggggaatatgatctggattgtgctcagtctgtaaat
gatgaaaatggagggagatctgatactggatcctgtgatgctatggaagtctccaatagg
gaatcaaatgatgattgttcatcatttatatcatcagaggttgatttcactctggaagga
gatgagactatgatggtacaattgaaggtttctcctaagatggaaggtatcctccagata
attggagtcaggtggacgttgtctggctctgtagtgggttatctttattttgattctcat
ttggcaaagaagaattgttcaaaagggaggattgctgcatcaaaaaaaacttccaaaaat
aaactcaagtttactgtgatcaagagtctacctaaacttgaggctcgtattcatcaacta
cctctaatggcctattcaggagatttgcagcgcatcattttggaagtttcaaaccattca
gactcatcggtgaaaaatatgaaactaaagataagtcatccaagatttgtcgttcctggg
agacttgaagacctggacatggaatttcctggatgtttagaaaagcatataagccatgac
atacatgatatgcaggataatgctatggataagttgaaggggctttcttcatttcctaag
gatgctggaattcaaggtgggacgaccttactgtggccactctggctacatccagttgtg
ccaggaaacatatcattgaatatgtcgatctattacgaaatggtaactccatcagagcat
atgaattatcgcatcttaagaatgcgttatgatttggaggttcttccatccttggatgta
tcagtgcagattactccttccccctcaaagttgcaagagttccttgtgcgtatggacatt
gtgaacaggagcaactcaaagaatttccagcttcgccaagtatcatcagttggaaattca
tggcatctttcagaattgttgccaacccctttgggagatcaacaacaggatgaacgaaca
ctcaagcaggaaactatttaccgctcaagttctaattgcccccgtcaattgttagcagtt
ggtcaagggctatcacaattttttaagcttatggaagttagtaagacatcccgtttgaaa
ggtgcacttgagcggcaaagcagcttaagcctggatatctcaagcattagcaaatcagaa
attgatgtgtctagcatgcctctttcagaattccatattcaagaaatatggcatcaagag
aaacagtcggctcaggaacaaggaagaacagttgatttagttctgatctctcaatgggaa
aaaaccagccctgagccagagcagcagtcaggttcacaacagctttttgtccattattta
tgtcactgcagtgcggacatgcaaagtcccatacagtggcagatggatggtccccgaatt
gtgactcatgacttctctgattccttttgtgagattggcttccagctaactatccgaaac
agctctgattatattgcatcagttagtatcaatacctcagatgacatcccattccctagc
caacaaagtgatccatctcaaacatcacatgtggggtggcacgatatttctctctcaaac
ggtgggaaggtcccatccgatattcaagggcaaagaaacacatctactaggacatcagtg
gattcgagtttgccctttctttggtgtgcctcaagttcaactaagattaaattggaaccg
atgtcatccatggtggttcctgttcgaatttgtgttatggcacccgggacttatgacctt
tcaaattacacaataaattggaaactcaggttcggtacagaggaaaactcggtttcaggc
ttgttgggccggagctggggtacgagtcctggacatccattctatcttactgtgcttcaa
tctagttga
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