Amborella trichopoda: 18444538
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Entry
18444538 CDS
T02990
Name
(RefSeq) condensin complex subunit 1 isoform X1
KO
K06677
condensin complex subunit 1
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atr03036
]
18444538
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
18444538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
PDS5
Adaptin_N
U3snoRNP10
Motif
Other DBs
NCBI-GeneID:
18444538
NCBI-ProteinID:
XP_020529472
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MASPFTIPHNLVDLEEEPEDDRLFVRNLIQTQNLTPSGLDELVKGVVFDLSDKDVFCIEE
QEVFDQVYSLVKGFGHLEASARANLIESLRSNFSVLLPNIASLSRTPVSPHEAQAEAEPS
PHERVASHRNALKIYTFFLQTILLSGDSGSGNAPKGTQSKSKKHSVQTWNWEVHRGRITH
LLASALETDLKPLYGMSDPEENYISFVVKSAFSMFENNTLLKDPETKDALCRIIGACGTK
YHYTMQTAASILHLIHKHDYLPQHMADLVAWAEKKYRDGSLALALITEIGRMNTKDFTRD
TAGADNVGRFLVELSDRLPKLVSTNIGILVPHFGGESYKIRNALVGVFGKLIAKAFKDVE
GDSAAKAHRLRGKQAMLEILLERCRDVSAYTRSRVLQVWAELCEERAVSIGLWNEVTEIA
AGRLEDKSAFVRKSALNLLITMLQYNPFGPQLRTSSFEGTLEKYKQKLQEMAPAEHSEES
GQGEVIDESTAHEDDGDVDSKLSNGGNGSINQIDSQSQDIGGESCSFSVHNGVSIEGPLG
IANLEQTRALVASLEAGLRFAKCLSSTMPTLVQLLASSTATDVEHTILLLMRCRQFQIDG
AEACLRKMLPLVFSQDKSIYDAVEGAFITIYVQKSATEAAANLLHLAIDSNIGDLAALEF
IVSTLVAKGDISASVISALWDFFCFNVSGVTAEQSRGALSVLCMAAKTSTKILGSHLQDI
IDIGFGRWAKVEPLLARTTCIALERLPDEDKQKLVSSCGNGSRVFSILQTLINGYWLPDH
IWYSAVEKAISTIYIVHPTPEVLAAEVVRQVQNALFGCIAGEKESSDLDGDGANGGNFIS
AVQVSTLSRYFFVVGHVALNHLVYIETCVKKIQKQKTKKERSLPEDVQSGGMGAPLQVAA
QDNNINAELGINASDDAKLDSLSEKAEKEIVSGNNAGKNLIGLCAPVLTKLCRNFSLVQK
FPELHASGMLGLCKLMVIDANFCEANLQLLFTVAESAPTEAVRSNCTIALGDLAVRFPNL
LEPWTEKMYGRLRDPIVSVRKNAVLVLSHLILNDMMKVKGYINEMALCLEDMDERIANLA
KLFFNELSKKGSNPIYNLLPDILSRLSNDNLEEQTFCNIMQYLIGLIKKDKQMEGLVEKL
CNRFCGVTDIKQWEGIAYCLSQLAFTEKGMKKLIESFKSYEHALSEDSVVEHFRNIISKA
KKFSKPELRSCIEEFEEKLNMFHMEKKEQEMTTKNALFHQQKLEKFGNHTARSEGFQGEE
EEENASRGTGEVIDPHEEMIPSIRKSEVGNKELEESSNISSEMECSETGNLEFQSPQVSQ
RRPSKTKRNVGMGMQEKEKARSSTIRRTKSTKGLVDFVFILLVYVPMRGVESFLGRDWRG
EVLNNFLCLNILFKSISFSHIWPED
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcccttcaccatcccccacaatcttgtggacctcgaagaagaaccagaagat
gaccgcctttttgtacgaaacctcatccaaacccaaaacctaaccccttctggactcgat
gaacttgttaaaggtgtggtcttcgatctttcggacaaggatgtattttgtatagaagag
caagaagtatttgatcaagtgtactctcttgtaaagggttttggccatttagaagcctct
gctagggctaatttgattgagagcttgcggtcgaatttcagtgtccttcttccaaatatt
gcttctctctctagaactcctgtttctccacatgaggctcaagctgaggctgaaccttca
ccacatgaacgagttgcctcacatagaaatgcccttaagatttacacatttttcctccaa
accatccttctttctggagattcaggcagtggcaatgcccctaagggaactcagtccaag
agcaagaagcattcggttcagacatggaactgggaggttcataggggaaggattacccat
ttgcttgctagtgcccttgaaactgatctcaaacctctctatggaatgtctgatccagag
gaaaattacatatcttttgtagtcaagagtgctttctccatgtttgagaataacactttg
ttgaaagatcctgaaacgaaagatgccctttgccgaataatcggcgcttgtggaactaag
tatcattacacaatgcaaactgctgcttcaattttgcatctgatacacaagcacgattat
ctccctcaacacatggccgatttagttgcttgggccgagaagaaatacagggatggcagc
ttggcccttgctctgatcactgaaattgggcgaatgaatacgaaagactttacaagagac
actgctggagcagacaatgttggccgcttccttgttgaactttctgatcgattgcccaaa
ttggtatcgaccaacatagggattttggtgccccattttggaggtgaatcttacaaaata
agaaatgcccttgttggggtctttggaaagcttattgcgaaggcattcaaagatgttgaa
ggtgactctgcagcaaaagcccatagattacgtggcaaacaagcaatgcttgaaattctt
cttgaaaggtgtcgggatgtctctgcttataccaggagtcgagttcttcaagtgtgggct
gagctttgtgaagagcgtgctgtttctattggattatggaatgaggtcacagagattgca
gctgggagattggaagataagagtgcatttgtgaggaaatctgccctcaacttgctcatc
accatgttacagtataacccatttggtcctcagcttcgaacctcttcgttcgaaggaacc
ctcgagaaatacaagcaaaaacttcaagagatggcacctgctgagcattctgaggagagt
gggcaaggggaggtcattgacgaatccaccgcccatgaagatgatggggatgttgattca
aaattaagtaatggagggaatggtagtattaatcagattgattctcaatcgcaagacata
ggtggtgagagctgttcgttttctgtccacaatggagtttcaatagagggtcctctgggt
attgcaaatttggaacaaacgagggctctagttgcatctcttgaggctggtttgagattc
gcgaagtgcttatcgtcaacgatgcccacattggtacaactgttagcttcttcgactgcc
actgatgttgagcacacaatcctgttgcttatgcgctgcagacaattccagatagatggt
gctgaggcctgtctccggaaaatgctgcctttggtgttttctcaagataaatctatttat
gatgccgttgaaggggcatttattacaatctatgtacaaaaaagtgcaacagaggctgct
gcaaatcttttgcatcttgctattgactctaacattggagatcttgcggccctcgagttt
attgtgagtactttggtggccaaaggggatatcagtgcatctgtgatatctgcgttgtgg
gatttcttttgtttcaatgtcagtggagtgaccgcagagcaaagccgtggagctctatcg
gttctttgcatggcagcaaagacatcaacaaagattctcggctctcatttgcaagacatc
attgatattggttttggacgttgggccaaggtggaacctttactggctagaactacatgc
attgccctagaacgattgcctgatgaagataaacaaaaactagtgtccagttgtggcaat
ggcagcagggtgtttagtattttgcaaaccttaattaatggttattggctcccagatcat
atctggtattctgctgtagagaaggccataagtactatatacatagttcaccccactcct
gaagtcttagctgcggaggtggtgaggcaagtgcaaaatgctttatttggctgcattgca
ggagaaaaagaatcatctgatttggatggtgatggagccaatggtgggaacttcatttcc
gcagtgcaagtatcgacgcttagcagatatttctttgttgtgggtcatgtggccttgaat
cacttggtttatattgagacctgtgttaaaaagatccagaagcagaaaacaaagaaagag
agatctcttcctgaggatgtgcagagtggtggtatgggagcacctcttcaggttgctgct
caggataataatattaatgctgaattgggcatcaatgcttcggatgatgcaaagcttgat
tcactatcagaaaaagcagagaaagaaattgtgtcaggaaacaatgctggaaagaattta
atcggactctgtgcaccggtcttaacaaagctttgtagaaattttagtcttgtgcaaaag
tttccagaattgcatgcttcaggaatgctcggactttgtaagctaatggtcattgatgcc
aacttctgtgaagcaaatcttcagcttctgttcacggttgctgagagtgcgccaactgaa
gcggttcgctccaactgcacaatagcccttggcgatttggctgttcgtttccctaacctt
ttggagccatggactgagaaaatgtatggaagactgcgtgatcctattgtctccgttcgt
aagaatgctgttttggttctttcccatctgatattgaatgacatgatgaaggtaaaaggt
tacattaatgaaatggcgctatgcttggaagatatggatgagagaattgcaaaccttgcc
aaattattttttaatgagttgtcgaaaaaggggagcaaccccatttataatctactacca
gatattctcagtagattgtccaatgacaaccttgaggaacaaactttctgcaacattatg
cagtatttaattggtttgataaagaaggataaacaaatggaaggtcttgttgagaagctt
tgcaataggttttgtggtgtcactgatataaaacagtgggagggtattgcctactgtctt
tctcagttagcatttactgaaaagggaatgaagaagcttatagagtcttttaaaagctat
gaacatgccctgtcagaggattcggtggtggaacactttaggaacatcattagcaaggct
aaaaagttttcaaagccagagcttagatcttgtattgaagaatttgaggagaagctcaac
atgttccatatggagaagaaagagcaagagatgaccacaaagaatgccttgtttcaccaa
cagaaattggaaaaattcggaaaccacactgcaaggagtgagggcttccagggagaggag
gaagaagagaatgcttcaaggggaactggtgaagtcattgacccccatgaagagatgatt
ccaagcattcgaaaatcagaagtaggcaacaaggaattggaagaaagctcaaatatttca
agtgagatggaatgttcagaaactggaaacctcgagtttcaatcaccacaagtttctcag
agaagaccctccaaaacaaagagaaatgtagggatgggtatgcaagagaaagagaaggct
cgtagctctactatacgcaggaccaaatccactaaagggttggttgattttgttttcata
ctattggtgtacgttccaatgaggggtgtggaaagttttttaggaagagactggcggggg
gaggttcttaataattttctttgtttaaatattctcttcaaaagtatatccttctctcat
atatggcctgaagactag
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