Amaranthus tricolor (tampala): 130803049
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Entry
130803049 CDS
T09367
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atri03036
]
130803049
Enzymes [BR:
atri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130803049
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Meiosis-specific proteins
Others
130803049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
ResIII
HHH_5
Cdd1
AAA_22
DNA_pol_lambd_f
HHH
T2SSE
Motif
Other DBs
NCBI-GeneID:
130803049
NCBI-ProteinID:
XP_057523187
LinkDB
All DBs
Position
16:complement(4514151..4525725)
Genome browser
AA seq
1214 aa
AA seq
DB search
MESYNLRSVLELPIPFQSTFNFRYFNSLQSECFPCCFFSDVNMVISAPTGSGKTVLFELC
ILRLLSRSLSADGRFIHAKGTLKTIYVAPSKALVQEKLRDWNQKLNAWGINCLEMTGDND
SYNNKNIQEADLILTTPEKFDAVTRYKIKDGGLSFFSDIGLLLIDEVHLLNDPRGAALEA
IVSRFKMLSCRPEMKSSPLAHVRFIAVSATIPNLEDLAEWLVVPPQGMKRFGEEMRPVKL
TTKVLGYAAAKNDFLFEKRLQNYIFDILMQYSRGKAALVFCSTRKGAQEAAQKISQTAMT
FGYSNPFIKTTEQQERLRDASMSCTDKQLQSFILYGVGYHNGGLCMKDRNVVENLFLNGD
IQVLCTTNTLAHGINLPAHTVVIKSTQHYNKEKGTYMEYDRSTVLQMCGRAGRPSFDDTG
LVIIMTRRETVHLYENLLNGCEVVESQLLSCITEHLTAEIVQLTVPDITRAIEWMKCSYL
YVRMKKNPENYAVQKGFSVDRIERHMQDICVKKVNELSRHQIIWTDEDGFLLKPLEPGRL
MTKYYLKFDTMKYIMQSQTNCRLEDALHIVCRAEELAWIQLRRNEKKLLNDIHADKDGRL
RFHILGDKGKKKKRIQTREEKIFVLVNDYLTGDPLVHDLSLSQDANSICLSGCRIAKCMK
EYFFFKKNYKGALNSVALAKSMHHKLWDDSLYLLKQLPGIGMVTAKALHSMGITSFETLA
DADPRRIEIVASRKFPFGDHIKESLMALPPKVEMKIEASKGQRQGKPKLALTLTRLTEGR
FSKLHYADMVVGLEEQNLIIYHEKIRVNDFLSPYHKTVVLPNHQGKLTVKADLIFEEFIG
IDIHHKLELVEETKSDVTVKRGTNKSSSLPPAGVAPVKGATGSTKLTKAKSILNKANKKT
DDMPSFDLFDAEELEGFIDDTTEDDCMIISGNTIFDHIRKKAKDFPVIPKSGSIRFPTSE
ASNFSTEQNRVEQHASPGIFEMSAKVERSTDKQETIISEIQPLHDFNIGDAMINNPETSN
DLNCTGISHPQIEVTGKKGRRFETILNHVRKRSKNSPVINKQYTEGFSPGVQCHFPDKDE
APSHKNVVKQKENYSDKSVINLSPERIEIEFNSCAKTRKDMSCVSATSNRSLDLPFEAFS
DQHNKTFPVKSSLKFSSSCKVIQFEPPGHSKEPESSNFQNHLKEANRGSCSLETAGKKKN
VNSFLGFKSIFSFL
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtataacttaagatcagttttggagttgccaattccttttcaatcaacgttc
aatttcagatatttcaattctctgcaaagtgaatgctttccttgctgtttcttctccgat
gtaaatatggtcatttctgcaccaactggaagtggcaaaacagtgttgttcgagctgtgc
attttaaggcttctgtcaaggtccctttctgcagacggaagattcatccatgcaaaaggc
actttgaaaacgatctatgtagcaccttctaaggctttagtgcaagagaagcttagggat
tggaaccaaaagctaaatgcttggggcataaattgccttgagatgactggggacaacgat
tcttacaataataagaacattcaagaagcagatctaattctgactactccggagaagttt
gatgctgtgactcgctataaaataaaagatggtggcttgagctttttcagtgatataggg
cttctactcattgatgaagttcatctattgaatgatccacgtggcgctgctttggaagca
atagtgagcaggtttaaaatgctatcttgtagacctgaaatgaaatcaagccctctggcc
catgtacggttcatagctgtttcggcaacaatcccaaatctggaggatctggctgagtgg
ctagtggttcctcctcaaggaatgaaaagatttggtgaagaaatgagacctgtaaagctg
accaccaaagttctaggatatgcagcagccaagaatgattttctatttgaaaagcgactt
cagaactacatctttgatattttgatgcaatattctagaggcaaagctgctttagttttc
tgttcaactagaaagggagcacaagaggcagcacagaagatctcccagaccgccatgacc
tttggctattcaaatccattcatcaagacaactgagcagcaagaaagattaagagatgcc
tcaatgtcttgcactgataaacaattgcaatcatttattctctatggtgttggttatcac
aatggtggactttgcatgaaggatagaaacgttgtcgagaatctttttcttaacggtgac
attcaagttctatgcacaacaaacacactagctcatggaatcaatctaccggcacataca
gtggtgatcaagtccacacaacactacaacaaggaaaaaggcacctacatggagtatgac
agatccacagttctacagatgtgtggtagggctggccgtccatcttttgatgatacagga
ctggttatcatcatgacaagaagggaaacagtacatttatatgaaaatcttttgaatgga
tgtgaagtcgtagaatcacaactactttcttgcattacggagcatctgactgcagaaata
gtacaactgactgttcctgacattacacgggctattgaatggatgaagtgttcatacttg
tatgttagaatgaaaaagaacccagagaattatgctgtccagaaggggttctctgttgac
cgaattgagaggcatatgcaagatatttgtgtcaagaaagtaaatgaattgtcaaggcac
cagataatctggactgatgaagacggtttcctcttgaagccccttgaacctggaagattg
atgacaaagtactatttgaaattcgacacaatgaaatacatcatgcagtcccaaacaaac
tgcagactagaagatgcacttcatattgtttgccgagcggaggagttggcttggatacaa
ttgagacgcaatgagaaaaagcttctgaatgatatccatgctgataaagatggtcggctt
cgttttcatatccttggagacaagggaaaaaagaaaaagcgtattcagacaagagaagag
aagatatttgttttagttaatgattacttgactggtgatcctctggtccatgatctatcc
ttgagtcaggatgcaaattcaatatgcttaagtggatgtagaattgccaagtgcatgaag
gagtacttttttttcaaaaagaactacaagggagcattgaactcagttgctcttgcaaaa
tctatgcaccataagctgtgggatgacagtctttacttgttgaagcaattacctggcatt
ggaatggtgacggctaaggcattacattctatgggaataacttcattcgagacccttgct
gatgctgatccaaggagaatagaaattgttgccagtcggaaattcccattcggagaccat
attaaggaatctctaatggcattacctccaaaagttgagatgaaaatcgaggcaagtaaa
ggccaaaggcaagggaaacccaaactggcgctaacattgactaggctaacagagggtaga
ttcagtaaactacattatgcggacatggttgttggtctggaagaacaaaatttgattatc
taccatgagaaaatcagggtaaacgactttctcagcccataccacaagacagtggttttg
ccaaatcatcaaggaaagttgactgtcaaggccgatctgatttttgaagaatttattggt
attgatatacaccataagcttgaactggtggaagaaaccaaatcagacgtgactgtcaaa
cggggaaccaataaatcttcctctttacctcctgcaggagttgctccagtcaaaggagct
acaggaagtaccaaactaacgaaggcgaaatctatcttaaacaaagccaataaaaaaact
gatgacatgccctcttttgatctctttgatgctgaagagctagaaggatttatcgatgat
actactgaggatgactgcatgatcatatctgggaatacaatctttgaccacattcgtaaa
aaggccaaggatttccctgttatacccaagtccggttccattcgctttcccacatcagag
gcctcaaacttctctacagagcaaaatcgtgtagaacagcatgcttctcctggcatattc
gaaatgtctgcaaaagttgagcgaagtactgataaacaagaaacgattatttcagaaata
caaccattgcacgattttaacattggagatgctatgataaataatccagagaccagtaat
gatttgaattgtacaggcatatctcatcctcaaattgaagtgaccggaaagaaaggtcga
agatttgagacaatactcaatcatgtaagaaaaaggtctaaaaattcaccagttatcaac
aaacaatacacggaaggattttcccctggggtgcaatgtcactttcctgacaaggacgaa
gctccaagtcataagaatgttgtcaaacaaaaagaaaattactcagacaaatccgtgatc
aatttaagtccagaaagaatagagattgagttcaattcgtgtgcaaaaactcgcaaggat
atgagctgtgtttctgcaacatcaaacagatctttggatcttccgtttgaagcctttagc
gatcaacacaacaaaacatttcctgttaagtcatctctcaaattttcatcctcatgtaaa
gtgatccagttcgagcctccaggacactctaaagagcctgaaagcagtaattttcagaat
catctgaaggaagcaaatagaggaagctgttcacttgaaaccgcaggcaaaaagaagaat
gtcaattcgtttctcggattcaagagcatcttctcattcctctga
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