Amaranthus tricolor (tampala): 130805877 Help Entry 130805877         CDS       T09367                                  Name (RefSeq) DNA ligase 1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism atri  Amaranthus tricolor (tampala) Pathway atri03030   DNA replication atri03410   Base excision repair atri03420   Nucleotide excision repair atri03430   Mismatch repair Brite KEGG Orthology (KO) [BR:atri00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     130805877    03410 Base excision repair     130805877    03420 Nucleotide excision repair     130805877    03430 Mismatch repair     130805877  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:atri03032]     130805877    03400 DNA repair and recombination proteins [BR:atri03400]     130805877 Enzymes [BR:atri01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      130805877     6.5.1.6  DNA ligase (ATP or NAD+)      130805877     6.5.1.7  DNA ligase (ATP, ADP or GTP)      130805877 DNA replication proteins [BR:atri03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     130805877  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      130805877 DNA repair and recombination proteins [BR:atri03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      130805877    NER (nucleotide excision repair)     Other NER factors      130805877    MMR (mismatch excision repair)     Other MMR factors      130805877 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase CBX7_C Motif Other DBs NCBI-GeneID:  130805877 NCBI-ProteinID:  XP_057526678 LinkDB All DBs Position 2:39089708..39103483 Genome browser AA seq 789 aa AA seqDB search MFRHSSSILILRPLSFKPNYSSLISFNFSVNFKVRAMSSQSKPPSAFDKLMSNARKRSKA AADAKKNSNSSITNSSPKKSKTQDPICPTSENPNSNKTLESNLNKPIKSSPEKHQTQDPI SPILDNSNGKKPIKSNSKKVEVNVDEFVINLKKKPANFDPKSAAWWEDGEKVPFLFLAKA FELIKGESGRIVITDITCNLLRTVISKTSDDLLAVVYLLANKIAPAHQGLELGIGEASLI KALAEACGTSEAVVKKKYQDLGDLGDVAKEIRSKQSMMMKPPPLTIAKVFNTFHLIAQTS NQGSAEKKKNYIKSLIVAAKDCEPVYLIRLLQAKLRISLAEKTLLTALGQAAVYSEEHSK PPSDIQSPQEEAGNIVKQVYSVVPVYDKIIPALLTDGVWKLSKTCTFTPGIPIGPMLAKP TNGISEIIDKFQDMVFTCEYKYDGERAQIHFMEDGSVEIYSRNAERNTEKYIDVVEELPR FKKPSVKSFVLDCEIVAYDREKQKILPFQILSTRPRKNVVKSEIKVNVCVYAFDILHLNG KPLLQEQLNVRRQHLYDSFVEEPGYFQLATALASNDLEEIQKFLDAAIDASCEGLIIKTL EKEATYEPSKRSNNWLKLKKDYMDSVGDSLDLVPIGAFHGRGKRTGVYGAFLLACYDSNN EEFQSICKIGTGFSEAVLEARSSSLRSQVINEPKPYYCFGDTLKPDVWFEPVEVWEVKAA DLTISPVYCAAVGEVDPGKGISLRFPRLVRIREDKSPEDATSSEQVADMYRSQANNPHRK KKDDVEEDD NT seq 2370 nt NT seq  +upstreamnt  +downstreamnt atgttcagacattcttcctccattctcattcttcgcccactcagtttcaaacccaattat tcttccttaatatctttcaatttctctgtaaatttcaaggttcgagcgatgtcgtctcaa tcaaaaccaccttcagctttcgataaactcatgtctaacgctcgtaaacgtagtaaagct gctgccgatgctaagaagaattccaattcttcaatcactaattcttctccgaaaaaaagc aaaacccaagacccaatttgccctacttcagaaaaccctaattcaaacaaaaccctagaa tcgaatttgaataaacccattaaatcttctccagaaaaacatcaaacccaagacccaatt tcccctattttagataactctaatgggaagaaacctataaaatctaactccaaaaaagtg gaggttaatgtagatgaatttgttatcaatttgaagaaaaaacccgctaatttcgaccca aaatcagcagcttggtgggaggatggtgaaaaagttccgtttctttttcttgcaaaggca tttgaattgattaaaggcgaatctggtcggatcgtgattactgatattacttgtaatctt ttgaggaccgtgatttccaagacttctgatgatcttttggcggttgtttatcttttggcc aataagattgctcctgctcatcaaggtttggagcttgggattggagaggcttcgcttatt aaggcacttgccgaggcgtgtggaactagtgaagctgtggttaagaagaagtatcaggat ttaggtgatttgggggatgttgctaaagaaattcgttctaagcaaagcatgatgatgaaa cctcctcctttgactattgctaaagttttcaatacattccatcttatcgctcagacatct aatcagggtagtgcagaaaagaaaaagaactatatcaaatcacttattgtggctgccaaa gattgtgagcctgtatatttgatacggctgcttcaggcaaaattgcggatcagtctggca gagaagactcttcttactgccctgggacaggctgcagtatattctgaagaacactcgaag cccccttctgatattcaatcaccacaagaagaggctggaaacatagtgaaacaagtatac tctgtggttccggtgtatgataaaataattcctgctcttctcactgatggtgtatggaag ctatcaaagacttgtacctttacacctggtattcctataggacctatgctagcaaaacca acaaatggaatatcagaaataatagataaatttcaagatatggtctttacgtgcgagtac aagtatgatggagaacgtgctcaaattcatttcatggaagatggttctgtcgagatatac agccgaaatgccgagcggaacacggaaaagtatattgatgttgttgaagaacttccaagg tttaagaagccttctgtgaaatcttttgttttggattgtgaaattgttgcttatgatcgt gagaagcaaaagattcttccttttcagatacttagcacccgtcctaggaaaaatgtcgta aagagtgagataaaggtaaatgtttgtgtctacgctttcgacatattgcatttgaacgga aaacctcttctccaagaacaattgaatgttcgcagacagcatctttatgattcatttgtg gaagaacccgggtattttcagcttgccacagcacttgcatctaatgatcttgaggaaatt cagaagtttcttgacgctgctattgatgccagttgcgaggggttgattatcaaaacattg gaaaaagaggccacctatgagccttcaaagcgatctaataactggcttaaattgaaaaag gattacatggacagtgtcggggactctctggatctagtgcctattggagcattccatggt cgcgggaaacgaacaggggtttacggtgctttcctccttgcttgttatgacagtaacaat gaagagttccagagcatttgcaaaatagggaccggtttttctgaggcagtgcttgaagca cgttcgtccagtcttcgttctcaagtgataaatgaaccaaagccatactactgttttgga gacacccttaaaccagatgtctggtttgagcctgtcgaggtatgggaggtcaaagcagct gatttgactattagtccagtttactgcgctgcagttggtgaagtagatcctggcaagggg atttcactccggtttccacgtctggttcgtatccgagaggataaatctccagaggacgcc acatcatctgagcaggtggcggatatgtacagatctcaagcaaacaatccacaccgaaaa aagaaggatgatgtggaagaagacgactga

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