Amaranthus tricolor (tampala): 130810088
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Entry
130810088 CDS
T09367
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130810088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atri04131
]
130810088
Membrane trafficking [BR:
atri04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130810088
Hops complex
130810088
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
130810088
NCBI-ProteinID:
XP_057532014
LinkDB
All DBs
Position
4:29319100..29334066
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AA seq
843 aa
AA seq
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MAAAVSIAAEWQLLYNRYYRKPEIYSMKWKHIDLTRNKVACAPYGGPIAVIRDDSKIVQL
YAESALRKLRIFNSAGNQISETIWRNPGGRLISMSWTEDQTLICIVQDGTVYRYNIHAEL
IEPSISLGKECFEQSVVDCVFWGNGVVCMNEGFQFFCVPDFSNFRSDKDVVKLADPVLED
PPLCMTVIEPKYTMSGNVEVLLGVGDHVLLVDEDESREVGEGVGPLQKMVVSRDGKLLAS
FTHDGRLLVITSDFANIIFEHVCESALPPEQLAWCGLDSVLLYWDDALLMVGPCGDPVRY
FYDEPIILISECDGVRVLSNTNMEFLQRVPDSTVSIYEIGSTTPAALLYDALDHFDRQSA
KADENLRMIRSSLPEAIEACIDAAGYEFDVSRQRTLLRAASYGQAFCCNVPRDRFQEMCK
TLRVINAVRSPEIGIPLSIQQYRELTAPVLISRLINARHHLLALRLSEYLGLNQELVIMH
WACTKITSSLAMSDTALLSLLLDKLKLCKGIDYARVAEHADKSGRRKLAAALVEHEPCPS
KQVPLLLSIGEEDSALTKATDSGDTDLVYFVLFHIWHKRPALDFFGTIQAKPLARDLFMV
YSRCHDHEFLKDFYLSAGQLQEVAFLLWTESWELSKNPMASKGTPLHGPRVKLIEKARDL
FSETKEHIFESKAAEEHAKLLRIQHELEVSTKQAIFVDSSISDTIRTCIVLGNHRAAMKV
KTEFKVSEKRWYWLKVFALATIRDWDALEKFSKEKKPPIGYKPFVEACIDAEEKGEALKY
IPKLTDLGERAEAYARIGMAKEAADAASQAKDSELLGRLRLSFTQSTAATSIFDTIRERL
GVS
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcagtctccattgcagcggaatggcaactcctctacaatcgttactaccgg
aaacccgaaatatactctatgaaatggaaacacattgatcttactcgcaacaaggtagcc
tgcgcaccttatggtggtccaattgctgtaattcgtgacgattcaaagatcgttcaactt
tacgctgaatcagctcttcgaaagctccgaatattcaattccgctggcaatcagatttct
gaaactatctggagaaatcctggtggacgattgataagtatgtcttggaccgaagatcaa
accctaatttgcatagtgcaagacggaacggtttataggtataacatccatgctgagtta
attgaacctagtatttcgttagggaaggagtgctttgagcaaagtgtagtggattgtgtg
ttttgggggaatggagttgtgtgtatgaatgaaggttttcagtttttctgtgtgccggat
ttttcgaattttaggtcggataaggatgtcgttaaattggctgatcctgtgctcgaggat
cctccattatgtatgacggtgatcgagcctaagtatacgatgtcagggaatgtggaggta
ttgcttggtgttggagatcatgtattgttggtggatgaagacgagtcaagggaagtgggt
gaaggtgttggaccgcttcaaaagatggtggtttctagggatggaaagttattggcttcc
tttactcatgatgggaggctactggttattacctctgacttcgctaacattattttcgag
cacgtttgcgagtctgctcttcccccagaacagctggcctggtgtggactggacagtgta
ctattgtattgggatgatgctcttctgatggtgggcccatgtggagatccagtgcgctac
ttttatgatgaaccaataattttgatatcagaatgcgatggtgttagggttctttcaaac
acaaatatggaatttcttcagcgagttcctgattccacagtgtcgatttatgagatagga
agcacaacccctgcagctttgttatatgatgctttggatcattttgataggcaaagtgcc
aaggcggatgaaaatttgagaatgataagatcatcattgccagaggcaatcgaagcatgc
attgatgctgcaggttatgaatttgatgtttcacgtcaacgaacgttgttgagagctgca
agctatggtcaagccttttgttgcaatgttcctcgtgatcgtttccaagagatgtgtaaa
acattgcgtgtaataaatgctgttcgtagccctgagattgggatccctcttagtatacaa
cagtacagggagctaacagcaccggttttgatttctcgtttgattaatgcccgtcatcac
cttttggccctaagattatctgagtaccttggcttgaaccaggagcttgtcataatgcat
tgggcatgtaccaagataacaagttcgttagcaatgtctgatacagctctcctcagtctt
ttacttgacaagttgaaattatgtaaaggcatagactatgctagagttgctgagcatgct
gataaaagtggcagaagaaagttggctgctgctctggttgagcatgaaccttgtccatcc
aaacaggttccactgctattaagcattggagaggaagactcagctttgacaaaagccacg
gatagtggggatactgatcttgtgtattttgtcttgttccatatttggcacaagaggcca
gcattggacttctttgggacgattcaagccaaaccattagctagggatttattcatggtt
tactctaggtgtcatgatcatgaattcttaaaggacttctatttatcagccggacagctg
caggaagttgcatttcttttatggacggaatcctgggaattaagcaagaatcctatggct
agcaaggggacaccacttcatgggccacgtgtaaaacttattgagaaggctcgggatctt
ttttctgaaacaaaagaacacatctttgaatcaaaagctgcggaagagcatgcaaaactg
ttgagaattcaacatgagctagaggtgtccaccaagcaagcaatttttgtagattcaagc
attagtgacaccatccggacgtgcattgtactcggaaatcatcgagcagctatgaaggtg
aaaacagaattcaaggtttctgagaaaagatggtactggcttaaagtttttgcattagct
accattagagactgggatgcgctggagaagttctcaaaggagaagaaaccaccaattgga
tataaacccttcgttgaagcttgcatcgatgcagaagaaaaaggtgaagcgttgaaatat
atccccaaacttactgatcttggagaaagagctgaggcatatgctcgaataggaatggcg
aaagaagctgcagatgctgcttctcaggcgaaagatagcgagctgcttggtcggttgaga
ttgagtttcacccaaagtactgcagctacatcaatttttgacactattcgtgagaggttg
ggtgtttcataa
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