Amaranthus tricolor (tampala): 130810961
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Entry
130810961 CDS
T09367
Name
(RefSeq) ABC transporter B family member 13-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130810961
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atri02000
]
130810961
04147 Exosome [BR:
atri04147
]
130810961
04090 CD molecules [BR:
atri04090
]
130810961
Enzymes [BR:
atri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
130810961
Transporters [BR:
atri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
130810961
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130810961
CD molecules [BR:
atri04090
]
Proteins
130810961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
Zeta_toxin
RsgA_GTPase
DUF87
AAA_30
AAA_23
AAA
AAA_21
P-loop_TraG
nSTAND1
Rad17
Motif
Other DBs
NCBI-GeneID:
130810961
NCBI-ProteinID:
XP_057533063
LinkDB
All DBs
Position
4:32103192..32115673
Genome browser
AA seq
1250 aa
AA seq
DB search
MEIETATKMDDKEKCKNSSNNKNSQKINKSSLFALFSAADKLDYALMIIGGIGACIHGVV
LPFFFVLFGGLIDSLGKYSSDPHKMSSRVAQYAWYLVYLGLVLFASSWIGVAFWMQTGER
QTARLRLQYLEAILKKDINFFDTEAQNKNLVYHISSDAILVQDAIGDKIGHTLRYLSQFI
GGFVVGFTMVWKLSLVTLSIVPLIAVAAGFYTIILSTFSKKAEATYAESGKVAEEIISQV
RTVYSFVGECRAVERYSRSLEKGEKIGKKSGVAKGLGIGLTYALLLCSWALLLWYSNILI
RHHETNGGKAFTTILNVVFSGFGLGQAAPNLAAIAKGQAAVGNIIRLIKSDNDSSKRLDS
GITLRNISGEIKFNEVCFAYPSRSKMIFEGLSFSVSSGKSFAVVGPSGSGKSTIISLVQR
FYVPISGSILLDGHDLRNFSLKWLRQQMGLVNQEPVLFGATIAENILCGKEGANIQQLEE
AAKAANAHSFIQSLPNGYHTQVGEGGTQLSGGQKQRIAIARAVIRNPKILILDEATSALD
SESEHIVQKALEVIMSQRTTIVVAHRLSTVRDADQIIVLKNGTLVELGNHAQLISKGGEY
AALVELQVLESRPFKASIGLEQTTQEIWSNSKQSNNNVSPLKDSRSFSNREQKLSNNNKE
NHPKTSLKELMMLNVSEFPYAILGSIGAAFVGIQAPLLAFGITYMLTAFYSNDESRIKYD
VRLIAFAFFGVALVTLPICLMQHYFYTLMGERITTRVRLKMFSAMLSNEIGWFDQEENSV
GSLTSKLAADATLVRTTLVDRLSTIVQNTSLITAAFILAFTLSWRIALVTIAMFPVLIAG
SLAEQLFLKGFGGDYTSAYSKANTLAREAISNIRTVAAFGVEQQIAKKFASHLKLPNKQA
SIQGHISGFGYGILLLLNFSFYALTLWYGSTLIKHQKGTFGDIIKSFMILIASAFSIAEA
LSMAPEIVKGSDALKSIFYILKRKTEIDSNDPKSRIVTNVKGDIEFRNVSFRYPSRLEID
VLEDLSLEIPAGRSLAIVGQSGSGKSTLIALVMRFYDPFSGSVLIDGVDIRSMNLKSLRK
SLGLVQQEPTLFSTTIYENIQYGNEGATEIEIMEAAKAANAHEFISRMPEGYHTRVGENG
SQLSGGQKQRVAIARAILKDPSILLLDEATSALDTSSEKIVQEALDKLMHSRTTIIVAHR
LSTIRDADSIAVMSQGKVCEMGTHEELISTQGSVYAQLLNLQQEKTQLVS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggagatagaaacagctacaaaaatggacgataaagaaaaatgtaaaaacagttcaaat
aataaaaatagccagaagattaataaatcgtctttgtttgcattgttttcagcagctgat
aaattagactatgccttgatgataattggaggtataggtgcatgcatacatggtgttgtt
cttccttttttcttcgttctattcggcggtttgatcgactcgctcggaaaatattcttca
gatcctcataaaatgtcttcccgtgtagcacagtatgcttggtacctggtttatcttgga
ttggtattatttgcaagttcttggataggagttgcattttggatgcaaacaggcgaaagg
caaactgctcgcttacgtttacaatatctagaggctattttaaaaaaggatattaacttc
tttgatactgaagcacagaacaaaaacttagtttaccatatttctagtgatgcaatacta
gtacaagacgccattggtgataagataggacatacgttgcgctatctttctcaattcata
ggcggttttgtagtaggcttcactatggtgtggaagctttccctagttactttatctatt
gttcctttgattgctgttgccgctggattttacactataatcctatctacattttcaaaa
aaagctgaagctacttatgctgaatctggcaaggttgctgaagagattatctcacaagtt
cggacagtatattcgtttgtgggagagtgtagggcagtggaaaggtactcaagatcactt
gagaaaggagaaaaaatagggaaaaaaagtggagtagcaaaaggtcttggaattggctta
acatatgcacttttgttatgttcttgggctttacttctatggtattccaacatacttatt
aggcatcatgaaactaatggaggcaaagcttttactaccattctcaatgttgtcttcagc
ggatttggactaggtcaagctgctccaaatcttgctgctatagctaaaggtcaagctgct
gttggcaatataattagattgattaagagtgataatgattcttctaaaaggttggattct
ggaataactttacgaaacataagtggtgaaattaagttcaatgaagtctgctttgcttat
ccttcaaggtctaaaatgatcttcgaaggtctaagtttctcagtttcttctggaaagagt
tttgctgttgtgggccctagtggctcaggaaaaagcaccattatttccttggttcaacgc
ttctatgttcccatttcaggaagtatattgttggatgggcatgatttacgaaatttcagc
ctgaaatggttgagacaacaaatgggattggttaatcaagaaccagtcttatttggtgca
accatagccgagaacattctatgtggcaaagaaggtgcaaatatacaacagcttgaggag
gctgctaaagccgcaaatgcccattctttcattcaatcattacctaatggttatcacact
caggtcggagaaggaggaactcaactttccgggggccaaaaacagcgaattgccatcgca
agggcggtcatacgaaatccaaaaatactaatcttagacgaagccactagtgctcttgat
tcggaatcggaacacattgttcagaaagcattagaagtgatcatgtcacaaagaacaacc
atcgttgttgctcatcgattgtccactgttcgagatgctgatcaaatcatagtcctcaaa
aatggaacgcttgtagaattgggaaatcatgcacaattgatttcaaagggtggagaatat
gcagctctagttgaactacaggtattagaaagcaggccttttaaagcatcaattggcttg
gaacaaacaactcaagaaatctggagcaattctaagcagtccaacaataatgttagcccc
ttgaaagattcaagatcattttccaatagagagcagaaattaagtaataataataaggaa
aatcatcctaagacttccttgaaagaattgatgatgctgaatgtatcagagtttccttat
gcaattcttggctctattggggctgcttttgttggaatacaagctcctttacttgccttt
ggtataacatatatgttaacggcgttctattcgaacgatgaatcgaggatcaagtatgat
gttcgattgattgcctttgctttctttggggttgctcttgttactcttcccatatgtttg
atgcaacactacttctatactttgatgggagaacgaatcaccactcgtgttcgcttaaag
atgttttcagctatgctttccaacgagattggatggttcgaccaagaggagaacagcgta
ggctcactgacgtcaaagctagcagccgatgcgacgctcgtaaggacaactcttgtggac
cgtctatcgacaattgtgcaaaatacatcactaataacagcagcctttatcttggccttt
actttaagctggcgtattgcacttgttactattgccatgtttcctgtactaattgctggt
tctttggcagagcaacttttccttaagggttttggaggggattatacaagtgcttactct
aaggccaatactctggctcgagaagcaatctcgaacattcgaacagttgcagcgtttgga
gtcgagcagcaaattgcaaagaagtttgcctcgcacttaaaactgccaaataaacaagct
agtatacaaggccacatatcagggttcgggtatggcatattgttacttttaaatttcagt
ttttacgcgctcacactatggtacggttccactctgatcaagcatcagaagggtacattt
ggggatataataaagtcgttcatgatcttaatcgcatcagccttttcaatagccgaagca
ctttctatggctcctgagattgttaagggatcagatgcactcaaatccatattttacatc
ctaaaaaggaaaacagaaattgactctaatgatcccaaatcaagaatagtaacaaatgtt
aaaggagatattgagttcagaaatgtgagctttcggtatccatcaagacttgaaatagat
gttcttgaggatttaagtctcgagattcctgcaggaaggagtcttgcgatagtgggtcaa
agtggctcgggaaagagcacattgatcgccctagtcatgagattctacgatccattttct
ggctcggttttaatagatggagtcgacattagaagcatgaatttaaagtctcttagaaag
agtttagggctagtacaacaagagccaacactgttctcgaccacaatatacgagaacatt
cagtatggcaatgagggtgcaaccgaaattgagataatggaggcagccaaagcagcaaat
gcacacgaatttataagtagaatgccggaagggtatcacactcgagtaggggaaaatggg
tctcaattatcagggggacaaaagcaacgcgtggccattgctagggctatactcaaagat
ccatccattttactcttagacgaagctactagtgcactcgacacttcctcagaaaagatc
gttcaagaagctctcgacaagctcatgcatagtcggacaaccattatagtggctcatagg
ctctcaactatacgtgatgcagatagtatcgcggtcatgagccaagggaaagtttgtgag
atgggaacccatgaagagcttattagtacccaaggaagtgtatatgctcaactacttaat
ttacaacaggagaaaactcaattggtgtcttaa
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integrated database retrieval system
