Amaranthus tricolor (tampala): 130816100
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Entry
130816100 CDS
T09367
Name
(RefSeq) dnaJ homolog subfamily C GRV2 isoform X1
KO
K09533
DnaJ homolog subfamily C member 13
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130816100
03110 Chaperones and folding catalysts [BR:
atri03110
]
130816100
Spliceosome [BR:
atri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130816100
Chaperones and folding catalysts [BR:
atri03110
]
Heat shock proteins
HSP40 / DNAJ
130816100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RME-8_N
GYF_2
DnaJ
Motif
Other DBs
NCBI-GeneID:
130816100
NCBI-ProteinID:
XP_057538680
LinkDB
All DBs
Position
6:24575598..24604355
Genome browser
AA seq
2601 aa
AA seq
DB search
MDFVTRHSPISSSSAPTTASSDQQHHRPETASSPSSNVPHVAEEPEYLARYLVVKHSWRG
RYKRILCLSNVAIITLDPSTLSVTNSYDVGNDFDVASPILGRDENSFEFNLNVRTDGKGK
FKSIKFSSRYRASILTELHRIKGIAVGAVAEYPVLHLRRRNSDWVPYKIRITSIGVELVD
LKSGDLRWCLDFRDMSSPAIVLLADTYGRKGVDNGGFVLCPLYGRKSKAFQAASGSSTNV
ILSNMTKTAKNMVGVSLSVDSSQSLSAVEYIKQRAKEAVGADETPCGGWLVTRLRTAAHG
TVNLPSLSLAIGPRGGLGDHGDTVSRQLILTKVSLVERRPANYEAVIVRPLSSVSALVRF
AEEPQMFAIEFNDGCPIHVYSSTSRDSLLAAVRDLLQSEVQCAIPVLPRLTMPGHRIDPP
CGRVHLLRLLHPPGHVNALADNESASMHLKHLAAAAKDAVSEGGSIPGSRAKLWRRIREF
NACIPYSGVPPNIDVPEVTLMALITMLPATPNFPPESPPLPPPSPKAAATITGFISCLRR
LLASKSAASHVISFPAAVGRIMGLLRNGSEGVAAEAATLVAVLIGGGPGDSNVFTDTKGE
RHATFMHTKSVLFAHHNYVIILVNRLKPISVSPLLSMAVVEVLEAMICEPHGETTQYTVF
VELLRQVAGLRRRLFALFAHPAESVRETVAVIMRTIAEEDAIAAESMRDAALRDGALLRH
LLHAFFLPAGERREVSRQLVALWADSYQPALDLLSRILPPGLVAYLHTRCDEVEDSHNLD
DPLNTSISRRQRRLLQQRKRRIGKSTVTEEHNLSSANANDIGDSANQTGAYRGPDQRSSP
EVHVVVHTSTVHAGESLTADLATQHDQLGDPVPSDGLLASNEPLDTVALNPDVSDVNMGS
LQNSGVPAPAQVVVEHTPVGSGRLLLNWPEFWREFSLDHNRADLIWNERTRQELREALQA
EVHNLDVEKERTEDIVPRGSAAENVAGTNNLPQISWNYSEFSVRYPSLSKEVCVGQYYLR
LLLESGYSGRALDFPLRDPVAFFRALYHRFLCDADIGLTVDGAIPDELGKSDDWCDMGRL
DGFGGGGGFSVRELCARAMAIVYEQHFLTIGPFEGTAHVTVLLDRTDDRALRHRLLLLLK
VLMKALSNIEACVLVGGCVLAVDLLTVVHEASERTSIPLQSNLIAATAFMEPLKEWVLID
KDGSQVGPMEKDAIRRLWSKKAIDWTTRCRASGMADWKKLRDIRELRWTLSVRVPVLTPT
QVGEAALCILHSMVSARSDLDDAGEIVTPTPRVKRILSSPRCLPHISQAMLSGEPSIVEA
AAALLKAIVTRNPKAMIRLYSTGAFYFALAYPGSNLHSIAQLFHVTHVHQAFHGGEEAAV
SSSLPLAKRSVLGGLLPESLLYVLERSGPAAFAAAMVSDSDTPEIIWTHKMRAENLICQV
LQHIGDFPQKLSQHCHALYDYAPMPPVTYPELRDEMWCHRYYLRNLCDEIRFPNWPIVEH
VEFLQSLLAMWREELTRKPMDLSEEEACKILEISFEELSAENSLKAHFSEISEENVNLSK
QIENTDEEKLKRQYKKLAIRYHPDKNPEGREKFLAVQKAYERLQASIQGLQGPQSWRVLL
LLKGQCILYRRYGSVLEPFKYAGYPMLLSAITVDKDDNNFLSSDRALLLVAASELTWLTC
ASSSLNGEELVRDGGIQLLATILSRCMCVVQPTTPASEPSAIIVTNVMRTFAVLSQFEAA
RVEILRLPCLIEDIVHCTELELTPGAVDASLQTISHLAVSSELQDALIKAGVLWYLLPLL
LQYDSTAEESEVNEAHGVGASVQIAKNLHAARAFEALSRLSGLCTDGIPAPYNKATVVAL
QALLTPKLASMLKEQTPKELLSKLNSNLESPEIIWNSSTRCELLKFVEEQRTSQGPHGFY
DLKESHEFTYDSLSKELCVGNVYLRVYNDQPDFEISEPEAFCIALVDFIYSLVHGQSTTT
SLLHSNKALSTSRNETSESRIETEDHSHGLQTGENSCLGFSDEKVAKEDDSVLLKNLRSA
LSSLKNLLTSSPNLASVFSTKERLLPIFECFSVPDASNTGISQLCLNVLSLLTAYAPCLE
AMVADGSSLLLLLQMLHSSPNCREGALHVLSALASTSELAWAAAKHGGVVYILELLLPLQ
EEIPLPQRAAAASLLGRLVGQPMHGPRVAITLARFFPDGLVSVIRDGPGEVVVSALDQTT
ETPELVWTPAMAASLSAQIATMASDLYKEQMKGPVIDWDVPEQASSQKEMRDEPQVGGIY
VRLFLKDPKFPLRNPKRFLEGLLDQYVSSVAATHYDTQASDPELPLLLSAALVSLLRVHP
ALADHVGYLGYVPKLVAAMAYEGRRETMASRDVDHVSHDANGSYDTEDAMSQPSKQTPRE
RIRLSCLRVLHQLAASTTCAEAMAATSAGTPQVVPLLMKAIGWHGGSILALETLKRVVVA
GNRARDALVAQGLKVGLVDVLLGLLDWRAGGRNGLCSQMKWNESEASIGRVLAVEVLHAF
ATEGAHCSSVREILDASDVWSAYKDQRHDLFLPSNAQSAAAGVAGLIESDSSRLKYALTA
PPSQPSIERSSTSNEVQDLYR
NT seq
7806 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgtcactcgacattcccccatttcctcctcctctgcacctacaactgcttca
tctgatcaacaacatcaccgccccgaaactgcttcctcaccctcgtctaatgtgccgcat
gttgctgaggagccggagtatctggctcggtacttagttgttaaacattcgtggcgagga
cgatacaagaggattttgtgcttgtctaatgtcgctattattacgcttgatccttccact
ttgtccgtaacaaattcatatgatgttgggaatgattttgatgtggcgtcccccattttg
ggacgggatgagaactcttttgagtttaatttgaatgttaggactgatgggaaagggaag
tttaagtctataaagttttcgtcgaggtatagggccagcattttgacagagttgcatagg
attaagggtattgcggttggtgcggtggctgagtatcccgtgcttcatcttcggaggcga
aattctgattgggttccttacaaaataaggattacatcaattggagttgaacttgtggac
ttaaagtctggtgaccttcgctggtgcttagatttcagagatatgagttcccctgctatt
gtccttctagctgatacttatggaagaaaaggtgttgataatgggggttttgttctttgc
ccgctatatggaagaaagtcaaaagcctttcaagctgcttccggctcctcaaccaatgtg
atactatcgaacatgacaaaaactgcgaaaaatatggtgggggtttcactttcggtggat
agttcacagtcactatctgctgttgagtatatcaagcaaagagctaaagaggctgttgga
gctgatgaaaccccttgtgggggttggttagtgacaagactcagaactgctgctcatgga
actgtgaatcttcctagtttgagtttggcgattgggccaagaggagggcttggggatcat
ggtgatactgtttcgcgtcagctgattcttacaaaagtctcactggttgagaggcggcca
gcgaattatgaggctgtcattgtccgtccattatcttctgtcagtgctcttgttcgattt
gctgaggagccacagatgtttgccattgaatttaatgatggttgtcctattcatgtttac
tcaagcacttctcgcgatagcttgcttgctgcagttcgtgatctgttgcagtctgaagtg
cagtgcgcaatacctgttctaccacgattgacaatgccaggtcatcggattgacccgccg
tgtgggagagttcatttattgaggttgttacatcctcctggtcatgttaatgctcttgct
gataatgaaagtgcatcaatgcatttgaaacaccttgctgctgctgccaaagatgctgtt
tctgaaggtggttcgattcctggctcaagagctaaactatggcgccgaatcagggaattt
aatgcatgtattccatatagtggagtgcctccaaacattgatgtgccagaggtgacattg
atggccctaataacaatgctgcctgccacgccaaattttccaccagagtccccaccctta
cccccaccttctcccaaagcagcagcaacaattactggatttatatcatgtttacgtaga
ttgctagcctccaaaagtgctgcttctcatgtaatttcttttcctgctgctgttggtaga
ataatgggtctgcttagaaatggatctgaaggtgtagctgctgaagctgcaacccttgtt
gctgtgttgattggtggtggtcctggtgactcaaatgtgttcactgacacaaaaggggaa
aggcatgcaacgtttatgcatacaaagtccgtcttatttgcccatcacaactatgtaatc
atccttgtgaatagattgaaacctatatctgtttcacctctactttctatggcagtagta
gaggttttggaagctatgatatgtgaacctcatggagaaactacacagtacacagttttt
gtggaactactacggcaagttgctggcttgcggcgtcgcctttttgccttatttgcccat
ccggctgagagtgtgagagagactgttgcagtaatcatgcgcactatagcagaggaagat
gccattgctgcagagtccatgcgtgatgcagctttacgtgatggtgctctcttaaggcat
ttattgcatgccttttttcttcctgctggtgagcggcgggaagttagtcgacagcttgtg
gctctctgggctgattcatatcaaccagcccttgatttattgtcaagaattcttccaccc
gggcttgttgcctatttacacacacggtgtgatgaagttgaagactctcataatcttgat
gacccgttaaacacatccattagtaggagacagagacgattacttcaacaaaggaagcgc
aggattgggaaatccacggtaactgaggagcataatttgtcatctgcaaatgcaaatgat
attggtgattcagcaaatcagacaggtgcttataggggccctgatcagagatcttcacca
gaggtgcatgtggtagtgcacacttctactgtacatgccggagagagcttgactgctgat
cttgctactcaacacgatcaattaggggatcctgttccatctgatggcctattagctagt
aatgagcctttagatacagttgctttgaatcctgatgtttctgatgtgaatatgggaagc
cttcagaactccggggttcctgctcctgctcaggttgttgtggagcacacacctgtagga
tctgggagattgttgcttaactggcccgagttttggcgagaattcagccttgatcataat
cgtgcagatcttatatggaatgaacgcactcgacaagagcttagggaggctttgcaggca
gaggttcataatctggatgtggagaaagagcggaccgaagatattgttcctagaggttca
gctgcagagaatgtggctggcacaaataatttgccccagatatcgtggaactactctgag
ttttctgttcgttatcctagcttgtctaaagaagtttgtgtgggtcaatactatcttcgt
ttgctgcttgagagtggctacagtggccgagcactagattttccacttcgtgaccctgta
gctttttttagagcactgtaccataggtttctatgtgatgctgatatagggcttacagtg
gatggtgctatcccagatgaactaggaaaatctgatgattggtgtgacatgggacgtcta
gatggttttggtggtgggggtggattctctgtaagagagttgtgtgcacgggctatggcg
attgtctatgaacaacacttcctcactattggaccttttgagggcactgctcatgtaact
gtgctcttagataggactgatgatcgagccttgaggcaccgtttgcttcttttactaaag
gtgttgatgaaagctttgtcaaacattgaggcttgtgtcttggttgggggatgcgtgtta
gctgtagatttgttgaccgtggttcatgaagcttctgagagaacttccattcctttgcaa
tccaaccttattgctgcaacggctttcatggagcccttgaaggaatgggttctgattgac
aaggatggttcccaagttgggccaatggagaaggatgctatcagaagattgtggtcaaag
aaagcaattgattggacaacaagatgtcgagcatcaggaatggcagattggaaaaagcta
cgcgatatacgtgagcttcgatggacgttgtctgttcgggttccggttctcacccctaca
caggttggggaggctgcattgtgcattttgcatagcatggtttctgcgaggtctgatctt
gatgatgctggtgagatagtcaccccaacgcctagagtgaagcgtatcttatcgagccca
cgctgtcttccacatatttctcaggctatgctttctggagaaccaagtattgtggaggca
gcagctgccttgctgaaggcaattgttacgagaaatcctaaagcaatgatacggctgtat
agcacaggggctttctattttgccttagcataccctgggtccaatcttcattcaattgca
caactgttccatgtgacacatgttcatcaggcatttcatggtggggaagaggcagctgtg
tcttcttcgttaccattggcaaaacgtagtgtcttgggtggtcttctccctgaatctttg
ctgtatgtgctggagcgctctggaccagctgcttttgctgcagctatggtctctgattct
gacactcctgagattatttggactcacaaaatgagggctgagaatcttatttgtcaggtt
ttgcagcatattggtgactttcctcagaagttgtcccaacattgtcatgcactctatgac
tatgctcctatgccacctgttacttatcccgaacttagggatgaaatgtggtgccaccgt
tattatctgaggaacctgtgtgatgagatacggtttccaaactggcctattgttgaacat
gttgagtttttgcagtcattattggcaatgtggcgtgaggaattgacacgtaaacccatg
gatctttctgaagaagaagcttgcaagatattggaaataagttttgaggagttatcagct
gaaaattctcttaaagctcacttttctgaaatttctgaggagaatgttaatttgtccaag
caaattgagaatactgatgaagaaaaattgaaacgacagtataagaaattggcaatcaga
taccatcctgataaaaatcctgaagggagggagaaatttcttgctgtccagaaagcttat
gagcgtctgcaggcttctattcaaggtttgcaaggtccccagtcgtggagggtgttgctc
ttgttgaagggacagtgtattttatacaggagatatggaagtgttttggagccctttaag
tatgctggttaccctatgctgctgagtgcaatcaccgtcgacaaggatgataacaatttt
ctgtcttctgatagggcattacttctcgttgcagcctcagagttgacctggctcacatgt
gcatcttcctcactgaatggggaagagcttgtgagggatggtggcatacagcttcttgcg
actatactctctcgttgcatgtgtgttgtgcagcctactactccagcaagcgaaccttct
gctattattgtcacaaatgtgatgcggacatttgctgtattgagtcaatttgaggctgct
agggttgagattcttcgattaccttgcctaattgaggacattgtacattgcactgagctt
gagctgactcccggagctgttgatgcttctctccagacaatttctcatcttgctgtgtcc
tctgagcttcaagatgcattaattaaggccggggtactatggtaccttttgccattatta
cttcagtatgattccacagcagaggagtctgaagtaaatgaggcacatggtgttggagct
agtgttcaaattgctaaaaatttacatgctgctcgagcctttgaggccctatcgaggcta
agtgggctgtgtacagatgggatcccagcaccatataacaaagcgacagttgttgccctt
caagctctgctaacacctaagctggctagtatgttgaaggaacaaacgccaaaggaactt
ttgtcaaaattaaactccaatttggagtctccagagattatatggaattcttctacacga
tgtgaactgttgaagtttgttgaggagcagcgaacatcacaaggccctcatggtttttat
gatcttaaagaatcacatgaattcacctatgattctctgtcaaaagagctctgtgttgga
aatgtctacttgagagtctataatgaccaaccagattttgagattagtgaaccagaagct
ttctgtattgccctagttgattttatttattccttagtacatgggcagagcaccaccaca
tctttgcttcacagtaacaaagctttaagtacctctagaaatgaaacatctgaatcaaga
attgagaccgaagatcactcacatggtctgcagactggtgaaaatagttgtttaggtttc
tcagatgagaaggttgcaaaagaagatgattcagttctgctcaagaatcttcgttctgct
ttaagttcgcttaagaacctgctgaccagtagtccaaatctggcttctgtcttttctacc
aaggagaggcttttgcctatatttgaatgcttttcggttcctgatgcatcaaatactgga
atttctcaactgtgtttgaatgtgctttctctcttgacggcctatgcaccctgtttagag
gctatggtcgctgatggatctagtttacttcttctactgcaaatgctccactcttctccc
aattgtcgtgaaggggctcttcatgttctttctgccttagcaagcacatcagaacttgca
tgggcagctgcaaagcatgggggagtggtctacattcttgaacttctgctgcctttgcaa
gaagaaatacccttgccacagagagctgcagccgcttcattgttgggaaggcttgttggc
cagccaatgcatggacctcgtgttgctataacattggcacgattctttccagatggttta
gtatcagtaatcagagatggtccaggtgaagttgtggtttctgcccttgatcaaacgact
gagacaccagaacttgtttggacaccagctatggctgcttcgttatctgcgcaaattgct
actatggcctcagatttgtacaaggaacagatgaaaggtcccgtaattgactgggatgta
cctgaacaagcatctagccagaaggaaatgagagatgagccacaggttggcgggatttat
gttagactattcttgaaggatcccaagttccctctaagaaatccaaagagattcttagaa
ggactgcttgaccaatatgtttcctctgttgccgctacacattatgacacacaagcttct
gatcccgaactaccactgcttctctctgctgcacttgtatcactgttgcgagtgcaccct
gcccttgcagatcatgtaggatatcttggatatgtgccaaaacttgttgctgcgatggct
tatgaaggaaggagagagacaatggcttcaagagatgttgatcatgtaagccatgatgca
aatggtagttatgatactgaagatgctatgtcacagcccagcaaacaaactcctagagaa
cgtattcgccttagctgtttacgtgtgttacatcagcttgcagctagtacaacatgtgcc
gaagctatggctgcgacgagtgctggaactcctcaggtggtcccacttttgatgaaagct
atcgggtggcatggtggaagcattttggctcttgagactcttaaacgtgttgtggttgcc
ggtaatcgtgcccgggatgcactcgtggcacaggggcttaaggttgggcttgtcgatgtt
cttctcggtcttcttgactggcgggctggaggaagaaatgggctttgctcacagatgaag
tggaacgaatctgaagcatcgattggccgtgtgcttgctgttgaggtattgcatgcattt
gcgaccgaaggagcccattgcagtagtgtgcgtgagatattggatgcctctgacgtatgg
agtgcatacaaggatcaaagacatgacctgtttcttccgtcaaatgcccaatctgctgct
gctggtgtggctggtctaattgaaagtgattcttcaagattgaaatatgccctaacagca
cctccgtcacaaccttccatagaaagatcatctacatcaaacgaagtgcaggacctgtac
cgataa
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integrated database retrieval system
