Amaranthus tricolor (tampala): 130827864
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Entry
130827864 CDS
T09367
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130827864
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atri01002
]
130827864
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atri04121
]
130827864
Enzymes [BR:
atri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130827864
Peptidases and inhibitors [BR:
atri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130827864
Ubiquitin system [BR:
atri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130827864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Nitroreductase
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
130827864
NCBI-ProteinID:
XP_057549722
LinkDB
All DBs
Position
11:complement(1432607..1449975)
Genome browser
AA seq
1119 aa
AA seq
DB search
MTVMTPAPIDQEDDEMLVPHSDIADNHQPMEVVAQAEPANNNNNAENQPVEDPPSSRFTW
KIDNFSRLNAKKHYSDVFVVGGFKWRILIFPKGNNVDYLSMYLDVADSQTLPYGWSRYAQ
FSLAVVNQIHNKYSVRKDTQHQFNARECDWGFTSFMPLSELYDPSRGYLVNDTVVVEAEV
AVRKIVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPS
ASIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG
TVVEGTIQKLFEGHHMNYIECVNVDYKSTRKESYYDLQLDVKGCRDVYASFDKYVEVERL
EGDNKYHAEQYGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDL
DRDDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKE
DLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCNVDEKDIA
EHLRERLKREQEEKEHKKKEKAEAHLYTIIKVARDDDLAEQIGKDIFFDLVDHDKVKSFR
IQKQMPFNLFKEEVAKEFGIPVQFQRYWLWAKRQNHTYRPNRPLTPLEETQSVGQLREVS
NKVHNAELKLFLEIELGVDLRPILPPEKTKDEILLFFKHYDPEKEELHFVGRLFVKANGK
PGEIIGKLKEMAGYAPEEEIELYEEIKFEPTVMCEHIDRKLTFRVSQLEDGDIVCFQKVL
PAETVERCRYPDVPSFLDYVHNRQVVHFRSLERPKEDDFCLELSRLHTYDDVVERVARQL
GLDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDITLPVLQ
GLKTLKVAFHHATKDEVTIHTIRLPKQSTVGDVLNDLKTKVELSHPDAELRLLEVFYHKI
YKTFPPSEKIENINDQYWTLRAEEIPEEEKNLGSHDRLIHVYHFTKETAQNQMSIQNFGE
PFFLVIHEGETLAEVKVRIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDTDVVSNRFQRRD
VYGAWEQYLGLEHADTAPKRTYTANQNRHTYEKPVKIYN
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcatgactcctgctcctatcgaccaagaagatgatgagatgcttgttccacat
tctgatatagctgataatcatcaacctatggaagttgttgcacaagctgaacctgctaat
aacaataataatgccgagaatcagcctgtggaagatcctccctcgtcgaggtttacttgg
aaaattgacaatttctcgaggttgaatgctaagaagcattattcagatgtgtttgtcgtt
ggcgggtttaaatggaggatacttatatttccaaaagggaacaatgtggattacttgtct
atgtatctggacgttgctgattctcagactttgccttatgggtggagtaggtatgcacag
ttcagcttagctgtggtcaatcaaattcataacaagtattccgtgagaaaagatactcag
catcagtttaatgctagggaatgtgattgggggtttacatcatttatgcctttaagtgaa
ttatatgatcctagcagaggatatcttgttaatgataccgttgtcgtggaagctgaggtt
gctgttcgcaagattgtggactactggtcctatgattccaaaaaagagactggatacgtt
ggattgaagaaccagggagctacatgttatatgaattctcttcttcagacactatttcac
attccgtatttcaggaaggccgtgtatcatatgcccactaccgaaaatgatatgccgtct
gcaagcattcctctggctcttcaaagtttattttacaagcttcaatacagtgacagtagt
gtggcaacgaaagaattgaccaagtcatttggatgggatacttacgattcattcatgcaa
catgatgtacaagagcttaatagagtcctttgcgaaaagcttgaagacaaaatgaagggt
actgttgttgagggcactattcagaaactgtttgaagggcatcatatgaattatattgaa
tgcgtaaatgtggattacaaatcaacacggaaggagtcctattatgaccttcaacttgat
gttaaaggttgtcgggatgtttatgcttcatttgataaatatgtggaagttgaacgtttg
gagggtgataacaagtatcatgctgagcagtatggtttacaggatgctaggaagggtgtt
ttattcattgatttccccccagttctgcaattgcagctcaaacgatttgagtatgatttt
atgcgtgatactatggtgaagattaatgaccgttatgaattcccccttgaacttgatctt
gaccgtgatgatgggaaatacttatcacctgatgctgatagaagtgtccgtaacctttac
acacttcacagtgttttggtgcacagtggtggagtgcatggtggacattactatgccttt
atacgaccaactctatccgatcaatggtacaagtttgatgatgaacgggttacaaaggaa
gacttgaagagagctttggaggagcagtacggtggtgaagaggagttaccacagacaaat
cctggtttcaacaacactcccttcaaattcacaaaatattcaaatgcatatatgcttgtt
tatattcgtgaaagcgacaaagataagatcatgtgtaatgtggatgaaaaggacattgca
gagcatctcagggaacgtttaaagagagagcaagaagagaaagagcataagaagaaggaa
aaggcagaagcacacctttataccattataaaggttgcacgagatgatgacctagccgaa
cagataggaaaggacatcttttttgatcttgtagaccatgacaaagttaaatcttttcgt
attcagaagcagatgccgtttaaccttttcaaggaggaagttgcaaaagaatttggcatc
ccagtacaatttcagcgatattggctatgggcaaagcgtcaaaatcacacgtatcgacca
aatcgaccgttgacacctttggaagaaacccaatctgttggacaactaagggaagtatct
aataaagttcataacgcagaactcaaactattcttggaaatcgagcttggagtcgattta
cgacctattctgcctccagagaagacaaaggatgagattctgttgttctttaagcattat
gatcccgagaaagaagagctccactttgtaggaagacttttcgtcaaggccaatggtaaa
cctggagaaattataggaaagttaaaggaaatggctggctatgctcctgaagaagaaatc
gaattatatgaggaaatcaagtttgaaccaactgttatgtgtgaacatattgaccgaaag
ctcacatttcgggttagccagctagaagacggggatattgtgtgtttccagaaagtcctt
ccagctgaaactgtagaaagatgccgttatccagatgttccctcgttcttggattatgtg
cacaatcggcaagttgtccatttcagatcactggagagaccgaaggaagatgatttttgc
ttagagttatcaagacttcatacctatgatgatgtagtggaaagagtggctcgtcaattg
gggttggatgatccatccaaaattaggcttacctctcacaactgttattctcagcagcca
aaaccccagcctataaagtatcggggtgtggatcatttgtcagatatgctggtccactac
aatcagacttctgacatactatactatgaagttctggatataacgttgccagtcttacaa
ggattgaaaaccttaaaagttgctttccatcacgcgacaaaagatgaagttaccattcac
acaatcagactgcctaaacagagtacagtgggggatgttcttaatgatctgaaaactaag
gttgaactgtcacatcccgatgctgagctgaggctgcttgaagtattttatcacaagatc
tataagacattcccgcccagtgaaaagattgagaacataaatgatcagtactggacgtta
cgagctgaagagattcctgaagaagaaaagaacttggggtctcatgaccggcttattcat
gtctaccatttcacgaaggagacagctcagaaccaaatgtcaattcagaattttggtgag
ccttttttcttagtgattcatgaaggagaaaccttggctgaggtcaaggtgaggatacaa
aagaaattgcaggttccagatgaagaattttccaagtggaagtttgctttcctttcacta
ggtcgtccagaataccttcaggacactgatgttgtgtcgaatcgctttcagagaagggat
gtttatggtgcttgggaacagtatcttggattagaacatgctgacacagctcctaaaaga
acatatacagcaaatcagaatcgtcatacatacgagaagcctgtaaaaatctacaattag
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integrated database retrieval system
