Amaranthus tricolor (tampala): 130828727
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Entry
130828727 CDS
T09367
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130828727
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atri02000
]
130828727
04147 Exosome [BR:
atri04147
]
130828727
04090 CD molecules [BR:
atri04090
]
130828727
Enzymes [BR:
atri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
130828727
Transporters [BR:
atri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
130828727
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130828727
CD molecules [BR:
atri04090
]
Proteins
130828727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_15
DEAD
DUF815
DUF87
AAA_24
AAA_7
nSTAND1
AAA_30
APS_kinase
DLIC
Motif
Other DBs
NCBI-GeneID:
130828727
NCBI-ProteinID:
XP_057550673
LinkDB
All DBs
Position
1:complement(7726739..7737998)
Genome browser
AA seq
1244 aa
AA seq
DB search
MEQNQQAAKDEEKATVKKVPFYKLFSFADSTDKLLMTIGSIAAIGNGVSMPLMIIVFGDL
VDAFGQNQSPEHIVHVVSKVCLKFVYLAIGVAVAAFLQVACWMVTGERQAARIRNLYLKT
ILRQDISFFDKETNTGEVVGRMSGDTVLIQDAIGEKVGKCQQMGATFVAGFVIAFTKGWL
LTLVMLSSIPLLLIAGALMTITLSKMATRGQAAYAKAAIVVEQTIGSIRTVVSFTGEKQA
IANYKKEIASAYKSGVLEGVASGAGMGVFTLVIFASYGLAIWYGSRLILEKNYTGGTVLI
VLFSVVFGSMSLGQASPSFSAFAAGQAAAYKMFETINRKSDIDPYDPNGKVLDDIHGDIE
LKDVFFSYPSRPEEQIFREFSLCISSGTTAALVGQSGSGKSTVISLIERFYDPQAGLVLI
DGINLKEFQLRWIRQKIGLVSQEPVLFASSIKENIAYGKDDATLEEIKAAAELANAAKFI
DKLPQGLDTLVGEHGTQLSGGQKQRVAIARAILKNPRILLLDEATSALDAESEKIVQEAL
DRIMVNRTTVIVAHRLSTVRNADLIAVIHQGKVVEKGSHTELLKDPEGAYTQLIKLQEIR
KESEQIEDTSEISRHSSLRKSSVRSLSHGSSGRISSSRHSFTLAEPKGNPTDELPSQEKP
EVSIWRLAALNKPEIPSLLLGSLSACANGLIFPIVSIIFSSAIKMFYQPPHILKKDSKFW
ALMFLIIGIASFVTQPLQFFFFAVAGCKLIQRIRSMCFEKAIYMEVGWFDEPDHSSGAIG
ARLSADASIVRALVGDTLGLTAQNIATAVAGLVIAFTANWILALIILGLIPFIGLNGYVQ
VKFLTGFSADAKKKYEEASQVANDAVASIRTVASFCAEDKVMQLYEKKCEAPIQAGVKQG
VVSGVGFGMSFALLFCVYAGSFYAGAQLVAHEKTTFGDVFKVFFALAFSAIGISQSSSFV
TDSSKSKNAASSVFAILDRKSKIDSSDASGMTLDNVKGEIVLQHVSFKYPSRPDIQIFRD
LCLTIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGCITLDGIEIQKFQLKWLRQQMGL
VSQEPVLFNDTIRANIAYGKGGNATEAEIITAAELANAHSFISSLQHGYDTIVGERGVQL
SGGQKQRVAIARAIVKDPRMLLLDEATSALDAESEKVVQDALDQVMVNRTTVVVAHRLST
IKNADVIAVVKKGVIAEKGKHETLIRIKDGAYASLVALHMSSSS
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaatcaacaggctgctaaagatgaggagaaggctactgttaagaaagttcca
ttttacaagctgttttcctttgctgattctactgacaagttgttgatgaccattggctct
attgctgctattggtaatggtgttagtatgcccctcatgatcattgtttttggtgatttg
gttgatgcttttggacaaaatcaaagccctgaacacatcgttcatgttgtatctaaggtg
tgtctgaaattcgtctacttggctataggagtagccgttgctgcttttcttcaggtggct
tgttggatggtcacaggagaacgacaggctgcaagaatcaggaacttgtacctcaaaact
attctccgacaagatatctcctttttcgacaaagaaacaaatactggagaagtcgttgga
aggatgtctggtgataccgttctcatacaagatgctataggtgaaaaggttgggaagtgt
caacaaatgggagcgacattcgttgccggttttgtgattgcgtttaccaaagggtggctt
cttactcttgttatgttatcctccataccccttctattgattgcgggtgctctcatgacc
attaccttatcgaagatggcaacacgaggccaagctgcttatgctaaggcggctattgtt
gtagaacaaacaatcggttcaattagaactgtggtatcatttaccggagaaaagcaagcg
attgctaactacaaaaaagagattgcaagtgcctataaatcaggtgtacttgaaggagtg
gcttcaggggcggggatgggtgtatttacactcgttatctttgctagttatggtttagcc
atatggtatggatcaaggttgattcttgagaaaaattacaccgggggtactgtcttaatc
gtccttttttctgtcgtgtttggatccatgtcactagggcaggcatcaccctcgtttagt
gcatttgccgcgggccaagccgcggcctacaagatgtttgagaccatcaatagaaaatcg
gatattgatccttacgacccgaatggaaaagtattagatgatattcacggagatatcgag
ttaaaggatgttttttttagttacccgagcagaccagaagaacaaatttttcgagaattt
tctctttgtatctcaagtggcacaaccgcagcattggtcggacaaagtgggagcgggaaa
tcgacagtgatcagccttatcgagaggttttatgatccacaagccggactagtgctaatc
gatgggatcaaccttaaagaatttcagctgagatggatcaggcaaaaaattggcctagta
agtcaagaacctgtgttatttgcttcatcaataaaagaaaatattgcatatgggaaggat
gatgctacacttgaagagattaaagcagcagcagagctcgcaaatgctgctaagttcatc
gataaattacctcaggggttagataccttagttggtgagcatggaactcaactatctgga
ggacagaagcaaagggtggccatcgcgagagcaattttaaaaaatccgcggattttactt
ctcgatgaagctacaagtgcgcttgatgcagaatccgagaagattgtgcaagaagcatta
gacagaataatggtaaaccgaacaactgtcattgttgctcatcgattaagtactgtgagg
aatgccgatttgatagcagtcattcatcaaggaaaggtggttgagaaaggttctcacact
gaactattaaaagatccagaaggagcctacactcagctcataaaactacaagaaatccga
aaagaatctgaacaaatcgaggacactagcgagatttcacgacactctagtctaagaaaa
tcgtccgtgcgatcactaagtcatggctcgtcaggtagaataagtagcagtcgacattct
ttcacactggcagaacccaaaggtaacccaacggatgaattaccatctcaagaaaaaccg
gaggtttcaatttggcgtcttgcagccctaaacaaaccagaaattccctcacttcttcta
ggatcattatctgcttgtgcaaatggtctaatattcccaattgtcagtataatattttct
agtgctataaaaatgttttaccaaccaccccatatactaaaaaaggattcaaaattttgg
gctttaatgttcttaatcattggtatagcatcatttgtgacacaacctcttcaattcttt
ttttttgccgttgctgggtgtaagttgatacaacgtattagatcaatgtgtttcgagaaa
gctatttatatggaggttggttggtttgatgagcctgatcattctagtggtgcgattggc
gcaaggctatctgctgatgcatcgattgtacgtgctttggttggagatacgcttggtttg
actgctcaaaatattgctactgctgttgctggtttggtgattgcttttactgctaattgg
atattagcattgattattcttgggttgataccgtttatagggttaaatggttatgttcaa
gtgaagtttttgacagggtttagtgcagatgctaagaagaagtatgaagaggctagtcaa
gtagctaatgacgcagttgctagcataagaaccgttgcttcattttgtgccgaagacaag
gtgatgcaactatatgaaaagaaatgtgaagctcctattcaagctggtgtaaaacaagga
gtggttagtggtgtaggttttggtatgtcctttgctttgcttttttgtgtatatgctgga
agtttctatgctggagctcagcttgttgctcacgagaagacaacatttggtgacgttttt
aaggtattctttgcattggctttctctgcaataggaatatcacaatcaagctctttcgta
actgatagtagcaagtctaagaatgcggctagttctgtatttgcaatccttgatcgtaaa
tctaagattgactcgagcgatgcgtctggcatgacattggataatgtaaagggtgaaatc
gtgcttcaacatgtaagcttcaagtatccgagtagacctgatattcagatttttcgagac
ctatgcttaacgattcactctggcaagactgtggcgcttgtcggagaaagtgggagcgga
aaatcaacagtcatttcgttgttacagagattttatgatccagactctggttgtatcaca
cttgatggaattgagattcagaaatttcagttgaagtggttgcgacaacaaatgggtctt
gtaagccaagaacctgttctatttaacgacacaatacgtgcaaacattgcttatggaaaa
ggtggcaatgcaactgaggctgaaatcataactgctgctgagcttgcaaatgctcacagc
ttcatatctagcttgcaacatggctacgatacaatcgtgggagaacgaggagttcaattg
tcaggaggacaaaagcaaagggttgctatagcccgagccatagtaaaggacccaagaatg
ctcctattagatgaagctactagcgcgcttgatgctgaatccgaaaaagttgtgcaagat
gcacttgatcaagtcatggtgaatcggactacagtcgttgttgctcatcgtttatccact
atcaagaacgcggatgtgattgctgttgtaaagaaaggtgtcattgctgagaaaggcaag
catgaaacattgattcgaattaaagatggggcatatgcttcattggtcgcacttcacatg
agttcatcatcttaa
DBGET
integrated database retrieval system
