Aegilops tauschii (wheat D): 109774539 Help Entry 109774539         CDS       T04345                                  Name (RefSeq) putative DNA ligase 4   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism ats  Aegilops tauschii (wheat D) Pathway ats03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:ats00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     109774539  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ats03400]     109774539 Enzymes [BR:ats01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      109774539 DNA repair and recombination proteins [BR:ats03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      109774539 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N BRCT_2 BRCT DNA_ligase_A_C PTCB-BRCT DNA_ligase_IV RNA_ligase Motif Other DBs NCBI-GeneID:  109774539 NCBI-ProteinID:  XP_020188863 LinkDB All DBs Position Unknown AA seq 1235 aa AA seqDB search MAATVRFGLLVAMFQAMTRDRTSAKKRGRLRTFLDRAYGASGRDDYFSALRLILPSLDRE RGSYGLKEAALAAALVEALGIAKDSPDAVRLTNWRRGGGGRNAGNFSLVAAEVLQRRQGM TSGGLTIKEVNDALDRLSASDTRSEKASVLSSLIKKTNALEMKWLLMIIIKDLKLGISEK SIFHEFHPDAEDLFNVTCDLKRVCEKLNDRSQRHKRQDIEVGKAVRPQLAMRVGNASSAW KKLHGKPVVAECKFDGDRIQIHKNGEEIHFFSRTFLDHSEYTSGMSKFIKENILVDRCIL DGEMLVWDTALNRFAEFGSNQEIAKAASEGLETNRQLCYIAFDILYSGDTSVIHQSLSER HEILRKVVKPLKGRLEILVPTGGLNTHRPPDEPCWSIFAPNIEDIEKFFKETVENRDEGI VLKDLDSKWEPGDRTGKWLKLKPDYIHAGADLDVIIIGGYYGSGRRGGEVAQFLVGLAVS SDDNSHPKRFLSFCRVGTGLSDEELATLVAKLKPHFSKSGTPKKTPRFYEVTNNSKERPD VWIESPDKSVILSITSDIRTIKSEVFAAPYCLRFPRIQRVRYDKPWHECLDVQSFVEIVH SSNGSMHKAEDDKSLKNDNLKNPKINKRGEKKNVSIIPSHLMKTDISGLKGETLIFANTM FYFVNTPPSYNLDYFHKLVVENGGSFSMNLNDSVTHCIAAEKKGIKYQAAIRHGRIIHYS WILDCCKQKILLRLQPKYILFLADFARHKFPEEIDSYADFYYWDIDVSDLKQIFINMDKV TVDPSMVHRYKKKYYADERFCFFQGCCIYLYHAPLVNEDYNVISDLALKRVKHDLTMHGG QYCSSLAPATHLVIVSVLQVYNFDILYKSFSPAERRYLHDKRLHVVSNKWLEDSVEKQMK LPETAYNLKPDTLEEIQIERSEEKAQPSNDKTAKNEDVEISHVKHARKRGRAAGNSSRTV RAAPRPVRTTRARRGNKQAKIDDGEPEENGPGETGQDDEKSNTDHISRMEEDNSDKDQRP PRAAPRPVRRTSARRGTRQAKTDYRESDESGPGETGEDQKLGTDSVVKMEEDSLDEDQGP PAGAQFITLDEREPKVVKLSAAEDTTTSPKFESKGTSERTDAGEGTSMAGEKIEQMVDPL HAMLLDMIPSLREDASSDPPAKVEHDPSRVRSSTSDNRVPVPETGGSASNPVAPAPRAGS SSYSAGVPAPDPNPVAPKKKKVSYKDLADEFLEDW NT seq 3708 nt NT seq  +upstreamnt  +downstreamnt atggcggcgacggtgcggttcgggctcctggtggcgatgttccaggccatgacgcgggac cgcacgtccgcgaagaagcggggccgcctccgcacgttcctcgaccgcgcctacggggcc agcggcagggacgactacttcagcgcgctccgcctcatcctcccgtccctcgaccgcgag cgcggctcctacggcctcaaggaggccgccctcgccgccgcgctcgtcgaagcgctcggc atcgccaaggactcccccgacgccgtccggctcaccaactggcgccgcggcggcggcggc cgcaacgcgggcaacttctccctcgtcgccgccgaggtgctgcagcggaggcaaggaatg acttctggtgggttgacaataaaggaggttaatgacgcactcgatcgtctatctgcaagt gacactaggtctgagaaggcttcggttctttcaagtctgatcaagaaaaccaatgccctt gaaatgaagtggcttctaatgattattattaaagacttgaaattggggatcagtgagaag agcatattccatgaatttcatcctgacgctgaggacttgttcaatgttacttgtgactta aaacgggtctgtgaaaagcttaatgatcgaagtcaaaggcataaacgtcaggatatagaa gtcggaaaggctgtgaggcctcagctagctatgagagtcggtaacgcttcatctgcatgg aagaagcttcatggcaaaccagtggttgctgagtgcaaatttgatggcgaccgtatccaa attcacaagaatggggaagagattcatttcttctcacggacctttcttgatcattctgaa tatacatctgggatgtccaaatttattaaggaaaatatcctggttgacaggtgtattttg gatggggagatgcttgtttgggacactgcgcttaatcggtttgctgaatttggctcaaac caggaaatagcaaaggctgctagtgaggggctggagacaaatcgacagttgtgctatatt gcttttgacattctttattctggagacactagtgttatccaccaaagtttgtcggagcgg cacgaaattctgcggaaggttgtcaaacctttaaagggtcgtcttgagattttggtccca acaggtggtctaaacacccatcgccccccagatgaaccatgctggtccatttttgctccc aatattgaagacattgagaaattcttcaaggagactgtcgaaaacagggatgagggaatt gtactaaaggaccttgattccaaatgggaacctggtgatcgaactggaaagtggcttaaa ctaaagcctgattatatacatgctggtgctgatctggatgttattattataggtggatat tatggatcagggcgtcgaggaggagaggttgcacagtttttagttggtcttgcagtgtct tcagatgataatagtcaccccaaaagatttctttcattttgtcgagtcggtactggtctc tccgatgaagaacttgccactctagtcgcgaagctgaagccccactttagcaaaagtggg acccccaaaaaaacacccagattttatgaagtaacaaacaattcgaaggagcggccagat gtttggatagaaagccctgataagtcagtcatactatctataacaagtgatattcgaaca atcaaatccgaggtttttgctgccccatactgcttgaggttcccccgcattcaacgagtg agatatgataagccatggcacgagtgccttgatgtgcaatcatttgtggagatcgtgcac tcaagtaatgggtcaatgcacaaggcagaagatgataagagtctgaaaaacgacaactta aagaacccaaaaataaacaaaaggggggagaagaagaatgtatcaatcatcccttcacat cttatgaagactgacatatcaggcttaaagggcgaaaccctgatatttgcaaacacgatg ttctattttgtcaacacccctccgtcatataacctcgactatttccataaactggttgtg gagaatggaggatctttctcgatgaatcttaatgactctgttactcactgcatagcagca gagaagaaaggtatcaaatatcaggcggccatacgccacggaaggatcattcattattcc tggatcttggactgttgcaagcaaaaaatacttcttcgtttgcaacccaagtatatcctc tttcttgcagattttgccaggcacaaatttcctgaagagatcgactcatatgctgatttt tactactgggacatcgatgtttctgacctgaagcagattttcatcaacatggacaaagtt actgtcgatccaagcatggtacatcggtacaaaaagaagtattatgctgatgaaagattc tgcttcttccagggctgctgcatttacttgtatcatgcacctttagtgaatgaggactac aacgtaatatctgatcttgcactaaagagggtgaagcacgaccttacaatgcatggtggt cagtattgcagtagccttgctcctgccacccatttggttatagtttcagttcttcaggtg tacaattttgacatattgtacaagagcttctctccagctgagaggcgttacctacatgac aaaagattgcatgttgtcagtaacaagtggttagaagattcagtggagaaacaaatgaaa ttgcctgaaaccgcctacaaccttaaaccggatacattagaagaaatacaaatcgaaagg agtgaggaaaaggcccagccctctaatgacaagactgctaaaaatgaggatgttgaaata tctcatgttaaacatgcaaggaaaaggggcagggcggctggcaatagttcgagaactgta cgggctgctcctaggccagtccgaacaacaagggctagaagaggaaataagcaggcaaaa atagatgatggtgaacctgaagaaaacggtcctggtgaaacaggtcaagatgatgaaaag tcgaacacagatcacatctccaggatggaagaagataacagtgacaaggaccaacgacca cctcgagctgctcctagaccagttcgaagaacaagtgctagaagaggaacccggcaagca aaaacagactatcgtgaatctgacgaaagcggccctggtgaaacaggtgaagatcaaaag ctgggcacagattccgtcgtaaagatggaagaagatagcctggatgaagaccaaggaccg ccagcaggtgcccagttcatcacactggatgagcgagagccaaaagtcgttaaattgagt gcagcagaggatacgacaaccagtccaaagttcgaaagcaaaggaacttctgaaagaaca gacgctggtgaaggaacgagcatggcaggtgagaagatagaacagatggttgatcctctg cacgcgatgctcctcgacatgataccgtcacttagggaagacgcgagcagcgatccccca gccaaagttgagcatgatccatcgcgtgtgagaagttccacgtcggataacagggttccg gtgcctgagacaggaggctctgcatccaatcctgtggctccggcaccgcgtgcaggaagt tcgtcatacagtgcgggggttccagccccagatccaaatcccgtggctccgaagaagaaa aaggtgagctacaaagatctggccgacgagtttctggaagattggtga

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