KEGG   Agrobacterium fabrum: Atu0494
Entry
Atu0494           CDS       T00070                                 
Symbol
lhr
Name
(GenBank) large atp-dependant helicase-related protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
atu  Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:atu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atu03400]
    Atu0494 (lhr)
Enzymes [BR:atu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Atu0494 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     Atu0494 (lhr)
DNA repair and recombination proteins [BR:atu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Atu0494 (lhr)
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII PSD4
Other DBs
NCBI-ProteinID: AAK86307
UniProt: Q7D1C7
LinkDB
Position
circular:480100..482478
AA seq 792 aa
MLLIAPTGAGKTLGGFMASLTDLAERGKVPPGSGFVGVHTLYISPLKALAVDIERNLTRP
VSEMGLPIVIETRTGDTPQAKRQRQKVKPPDILLTTPEQVSLLLANKEAERFFRDLKYVV
LDELHSLVTSKRGHLLSLALARVRRHAPDVRFIGLSATVAEPMDLRRYLAPQGQGEPPAG
LITVEGGAKPDISILHTEERIPWSGHSARYAGKDLYEALKQHQTTLVFVNTRSQAERVFQ
ELWTVNDDNLPIALHHGSLDAGQRRRVEAAMAENKLRAVVATSTLDLGIDWGDVDLVVHV
GAPKGASRLAQRIGRSNHRMDEPSKAILVPANRFEVMECRAALDANYIGAQDTPPIAEGA
LDVLAQHVLGMACAEPFDADELYREVTSASPYANLPRATFDRVVDFTATGGYALRTYERY
ARIRQMKDGRWRVSNPAVAQQYRLNLGTIVEAAELNVRMVKRNAKGTVGRGGMSLGKVEE
YFLEQLVQGDTFLFAGKVLRFEGIRENECLVSQAFSMDPKIPSYAGGKFPLSTYLADQVR
SMLADPARWQALPDQVRDWLEIQKEKSIIPKRDELLVETFPFRKRFFMVMYPFEGRLAHQ
TLGMLLTRRLERAGAKPMGFVATDYSLAIWAMEDIGMRLKSRRLSLADLLDEDMLGDDLE
AWLDESFMLKRTFRNCAVISGLIERRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILLEA
TRRDAAAGLLDIGRLGDMLKRIKGHTTHRALEHVSPLAVPVMLEIGRETVAGEAMDDVLA
EAADELIAEAMS
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgctgttgatcgcgccaacgggcgccggcaagacgctcggcggtttcatggcgtcgctc
accgatctggcggagcgcggcaaggtgccgcccggctccggttttgtcggcgtgcacacg
ctctatatctcgcctctgaaggcgcttgcagtggatatcgagcgcaatctcacgagaccc
gtttccgaaatgggcctgccgattgtgatcgaaacccgcacgggcgatacgccgcaggcc
aaacgccagcgccagaaggtgaagccacccgatatactgctgacaacaccggagcaggtc
tcgctgctgcttgccaataaggaagccgagcgctttttccgcgatctgaaatatgtggtt
cttgacgaactgcattccctcgtcacttccaaacgcggccacctgctgtcgctggcgctc
gcacgggtgcgtcggcacgctcctgacgtgcgcttcatcggcctttcggccacggtggcg
gagccgatggatctgcgtcgttaccttgcgccacaggggcaaggtgagccgccggccggc
ctcatcacggtggagggtggagcaaaaccggacatttccattttgcacacggaagaacgc
attccatggtctggccactccgcgcgttatgccggcaaggacttatacgaggcgttgaag
cagcatcagacgacactggtcttcgtcaacacgcgctcacaggccgaacgggtcttccag
gaactgtggaccgtcaatgacgacaatctgccgattgcgctgcatcacggctcgctggat
gccggccagcgccgcagggtggaggcggccatggcggagaacaagttgcgcgccgtcgtt
gccacctcgacgcttgatctcggcatagactggggcgatgtcgacctcgtcgtgcatgtc
ggcgcgcctaaaggggctagccgccttgcccagcgcatcggccgttccaatcaccgcatg
gacgagccgtcaaaggcgatcctcgttcccgccaaccgtttcgaggtgatggagtgccgg
gcagcgctggatgccaattacatcggcgcgcaggataccccgcctatcgccgaaggcgcg
ctagatgttctcgcccagcatgtgctcggtatggcctgcgccgaacccttcgatgcggat
gaactttatcgcgaagtcaccagcgcctcgccctatgccaacctgccgcgcgctaccttc
gaccgggtggtggatttcaccgcgacaggcggttacgcgctacgcacctatgagcgttat
gcccgcatccgccagatgaaggatggccgctggcgcgtttccaatccggctgtcgcccag
caatatcgcctgaacctcggcaccatcgtcgaggcggcggaactcaatgtccgcatggtc
aagcgcaatgccaagggcacggtcggacgcggcggcatgtcgctcggcaaggtcgaggaa
tatttcttggagcaactggtgcagggcgatacattcctgttcgccggcaaggttctgcgc
ttcgaaggcatccgcgagaatgaatgcctggtgtcgcaagccttttccatggacccgaaa
ataccctcctatgctggcggcaagtttccgctttccacctatttggcggatcaggtgcgc
tccatgcttgccgatcccgcccgctggcaggcgctgccggatcaggtccgcgactggctg
gaaatccagaaggaaaagtcgatcattcccaagcgcgacgagttgctcgtcgagaccttc
ccgttccgcaaacgcttcttcatggtcatgtatcccttcgagggacggctggcgcaccag
acgctcggcatgcttctgacgcggcggctggagcgcgcgggcgcaaaaccgatgggtttc
gtcgccaccgattactcgctcgccatatgggccatggaggatatcggcatgcggctgaaa
tcccgccgcctgtcgctggcggaccttctcgacgaggacatgctgggcgacgatctggag
gcgtggctggatgagtccttcatgctgaaacgcacgtttcgcaattgcgccgtcatctct
ggcctcatcgaacgtcgccatccgggcaaggaaaagaccggccggcaggtcacggtctca
gccgatcttatttatgacgttcttcgcagccatgagccggatcatatcctgctggaagcg
acgcggcgggatgcggcggcgggacttttggacattggccgtcttggcgatatgctgaag
cgaatcaagggccacaccacccatcgcgcgctggagcatgtctcgccgcttgccgttccg
gtgatgctggaaatcggccgcgagacggtggcaggtgaagcgatggacgatgtgctggcc
gaagccgccgacgagctgatcgcggaagccatgtcctga

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