Acidithiobacillus thiooxidans: GCD22_00620
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Entry
GCD22_00620 CDS
T06281
Symbol
traC
Name
(GenBank) DNA primase
Organism
atx
Acidithiobacillus thiooxidans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3560
MPTase-PolyVal
ArdcN
DUF2958
MnmE_helical
Motif
Other DBs
NCBI-ProteinID:
QFX95117
UniProt:
A0A5P9XMA9
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All DBs
Position
564036..569186
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AA seq
1716 aa
AA seq
DB search
MPVPAPSPSGNNTDRKDPRLELADRLIEQIGAGTASWQRPWEAGDVLAPVNAVTGKPYSG
VNYQNLMMFSPDPSDPRWCTYKQAQEQGWQVRKGEHGIPIEKWSRYEHKRTDEEIERLWA
QGAQNIEPVEERLGVRYYTVFHASQIDGIPPLERSPRLEIEGKPDDRLPKLAERLGVELR
YGGGRAFYRPSEDRVQMPPVESFEQAVGHDTTLLHELSHATGHERRLNRDLKNSFGSEKY
AIEELRAEMSAAMTAASLGIGFDPASQDLEEGREMGNSAAYLASWLKALPEKERKQILMQ
TIKDAQGISDYLIERTPELLVEQERPTVSRGDYVRYRNEIGQEVEGVVLDAAQPGEATRL
RRIYRWPNGTPGLDGADDIAPTVLPNDLVEHIPGAVTPGPDLDAIDPQTDAYQRTIGMDD
SRDRAGLAVLMAVETARGQPERAAALQAAALRAAALPERALDPELIAFLENRTRIRQGEH
PNFAGLSDPVANAEAFVERQGRTDPQRSAQWARALQESPVAYGEAVGLSPATVGLVASQL
NQGARRMERPQVGDFVRFEPHEPGVTSSPFSGRIIAALDTSGGDIRYHLRAETGPDQGIE
ARVYGRDGQFCEIALDQAVGFDRALAPEAEKAPQIQVGDFVITRRNQFGADWDTPSIVTR
IDDSEVRLQDLYRSGQEWEVAPARRMMSREDFDTALSHQVSGVVPPEIASEKLDFAASRD
RFVGVVRAFDAEHSLMYGKAPEPLTKVPDDVRPFLGGQQATVTDQLLRSSEEKGFFSDKM
QELQEIIRQMPATYETDGVPDSERPVSLRYFGPNGAQWFILEKDRGDPANEGNGFPNQMQ
AFGLADLGMGHPEVGYISIPEITRAGAELDYHFAPRTLLEVKLEHYPDLLPPEHRPVDPR
KEQALQEYQAFYAQLPQREEKLVTAVRERSERLAPADFRGFSDMMRDFRTGVDDTFGILR
EGENRGSSAPELRLAQAFAPEEISDLPAVQTAHDQARRLGERFHDLDREIRDAFKARLRE
HGKALLESGSLREPREIAQATYWKHGIEASPDSPMIGKVVGAIQDKDLKTLLGMIGHNSQ
NPGSEEVFTHITGVKLGKTQKERVAQLLEWAGPEKAQALRESNALAERERETRGLRDGMT
RAWEDLKGLRVEVGGQVVNGQEYVTLKVAGGQERIASGKAGAATTYHLVNDQGAYSRVKD
VRFTAFARRVLAMDADGMVRNALEKADIVQGIAPEGVTPKPAADLQKEEKAPEAPGKNAY
EQKIEARKERYRALSDKTRARAKAHVEQARRMADAIPFGQPILVGHHSEGRDRRYRERIH
QNFGKGFDLLEKAAYYERRAKGVNDYAISADDPDAVKKLRERVENLKSSQERMKAANAAI
RKHQKDGPEAQQAALERLGFQPDQAKAILTPDVMGTVGFASYSLSNNNANIRRLEERIQI
LEKAQALKDRETPYAWGTVRENREINRIQFRFEDKPDEEVRNLMKSSGFRWAPSEGAWQR
QWTGNAVYAARDVIKKLDALMPPEQTVAAPEPAQRLDTVPVSQSPDVSPGITVRDPSAAL
SAAIKDRDGDWYNLSVQENDGRLVGTLQRRDAETGLVETMPAGVFQPDVNYGVVAKFERE
SGELLAVGLSRGRDGGVDMKVFSQSRDAAVFAWQRIHEYPGHLRANEALQKVPDHPEGKV
IEQALGVDLKTLNPARVAPKASARRPEQQKQQGVEI
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtccccgccccatccccttcagggaacaacaccgataggaaagatccccgtctt
gagcttgccgaccgactgattgaacagatcggggcaggaactgcctcctggcaaaggccc
tgggaagccggcgatgtgttggccccggtcaatgcagtcacaggcaagccttacagcggg
gtgaactaccaaaatctcatgatgttctctccggacccgtccgatccacgttggtgtacc
tacaagcaggcccaggagcagggctggcaggtgcgcaagggtgagcatgggattcccatc
gaaaagtggtcgcgttacgagcacaagcgcaccgatgaggaaatagagaggctttgggcg
cagggcgcccagaacatcgagcccgtggaggaacggcttggtgtccgttactacacggtg
tttcacgcatcacagatagacggcattcccccgctggagcggtccccgcgtctggagatc
gaggggaaacccgatgatcggttgccgaagctggccgagcgcctgggcgtggaattgcgg
tacggcggcggccgggcgttttatcgtccgtcggaggaccgggtgcagatgcctcccgtg
gaatctttcgagcaggctgtggggcatgacaccaccctcctgcacgagctgtcccatgcc
acaggtcatgagagacgactgaaccgcgatctgaaaaactccttcggcagtgagaagtac
gccatcgaggagttgcgggcggagatgtccgcggccatgaccgcagcgagtttggggatt
ggctttgatcctgcatcccaggacctggaagaggggcgcgagatgggtaattcagccgcc
tatcttgcctcatggctcaaagccctgccggaaaaagagcgcaagcagatcctgatgcag
accatcaaggatgcccaggggatcagcgactatctgatcgaacggacgccggaattgctg
gtggagcaggagcgaccaaccgtctcccgtggcgattacgtccggtacaggaatgagatt
gggcaagaggttgagggcgtggtgcttgacgccgcccagcccggcgaagcaacgcgactg
aggcgcatctaccggtggcccaacggcacccccggcctggacggggcggacgacatcgcg
cccacggtactgcctaacgacctggtggaacacatcccgggcgctgtcacccccggtccg
gatctggacgccatcgatccgcagaccgatgcgtaccaacgcaccataggcatggacgat
tcgcgcgatcgggcgggcctcgccgtgctcatggcggtcgaaaccgcgcgtgggcagccg
gagcgggcggcggccctgcaggcggcggccttgcgggcggcagccttgccggaacgcgcc
ctggacccggagctgattgcgtttcttgaaaaccgcacccgcatccggcaaggcgaacac
ccgaattttgccggactgagcgatcccgtcgccaatgccgaagccttcgttgagcggcaa
ggccgtaccgatccccagcgttccgcgcaatgggccagagcgctacaggaaagcccggtg
gcttacggcgaggctgtgggcctcagtccggccacggtgggtctcgtcgcgtctcaactg
aaccaaggcgctcggcgcatggaacgaccccaggtcggcgatttcgtgcgttttgaaccg
catgaaccgggcgtgacatccagtcccttctcaggacggatcatcgcggccttggatacc
tctggcggcgatatccgctatcacctgcgggcggagacggggccagatcagggtattgag
gcacgggtatatggccgggacggacagttctgcgagatcgctctggatcaggccgtggga
ttcgaccgggctctcgctccagaggcagagaaagccccccagattcaggtcggagacttc
gtgataacccggagaaatcaattcggggcagactgggatactccctccatcgttacccgc
atcgatgactccgaagtccggttgcaggacctctaccgctctggccaggaatgggaagtc
gccccagccaggcgaatgatgtctcgtgaagacttcgatacggctctcagtcatcaggtt
agtggcgtggtgccgcccgagatcgcatcagaaaagctcgatttcgccgccagccgggac
cgattcgtcggtgtggtccgggcttttgatgccgaacacagtctcatgtacggcaaggca
ccggaacctttgacgaaggtccccgacgatgtgcggccattccttggaggccaacaggct
acggtgacagatcagttgctccgcagcagcgaagaaaaaggctttttctcggacaagatg
caggagttacaggagattatccggcagatgccggcgacctatgagactgacggcgtgccg
gacagcgagcgcccagtatccctgcgctattttggtcccaatggtgcccagtggttcatc
cttgagaaggatcgcggagatccggccaatgaggggaacggcttcccgaaccagatgcaa
gcttttggtctggcggacttaggtatgggccatcccgaagtgggctacatcagtattccg
gagatcacccgtgccggggcggaactcgattatcactttgcgccccggacccttttggag
gtgaagctggagcactacccagacctgcttccgccagagcatcgcccagtggatccgcgc
aaggaacaggcacttcaggagtaccaggcgttttacgcccagttgccacagcgggaagag
aaactggtgacggcggtccgcgagcgctccgagcgtctggctccggcggattttcggggc
ttctccgacatgatgcgggatttccgcacaggcgtggacgatacctttgggatcctccgg
gagggagaaaaccggggatcgtcggccccggaattacgcctggcgcaggcgttcgctccg
gaagagatctccgatctgcccgccgtccaaaccgcccatgaccaggcaagacggcttggc
gagcgatttcacgatctggaccgggaaatcagggacgctttcaaggcgcggctcagggag
catggcaaggcactgctggaatccggcagcctgcgcgaaccccgggaaatcgcgcaggcg
acctactggaagcacgggattgaggcaagtccggacagcccgatgatcggaaaagtggtc
ggggcgattcaggacaaggatctcaaaaccctgctgggaatgattggccacaacagccaa
aacccgggatcggaagaggtatttacgcacattacgggagtaaaactgggcaagacccaa
aaagaacgggtcgcacagttgctggagtgggccggtcctgaaaaggcgcaggccctgcgc
gaaagcaatgcgctggcagagcgggaacgggaaactcggggcttgcgggatggtatgacc
agagcgtgggaggatctgaagggcctgcgcgtggaggtcggtggccaggtggtgaatgga
caggagtatgtgacgctgaaagttgcgggcggccaggagcgcattgcttctggcaaggcg
ggtgcggcaaccacatatcatctggtcaatgaccaaggcgcatattcccgcgtcaaggac
gtgcggttcacggcctttgccaggcgggttttggccatggacgccgatggtatggtgcgt
aacgccctggagaaggcggacattgtgcaagggattgcgccggaaggggttaccccaaaa
ccagctgctgatcttcagaaagaggaaaaagcaccagaagctcccgggaagaacgcctac
gagcaaaaaatcgaggcgcgtaaggagcgctatcgcgccctttctgataagacgcgggcg
cgggcgaaagcgcacgtcgagcaggccaggcgcatggcggacgccatcccttttggtcag
ccgatcctggttggccaccacagtgaaggccgcgaccgtcgctatcgtgagcgcatccac
cagaactttggcaaaggcttcgacctgctggagaaggcagcgtattacgagcgccgcgcc
aagggcgtcaacgactacgccatcagcgcggacgatccggatgccgtgaaaaaactcagg
gagcgggtggagaatctgaagtcttcccaggagcgcatgaaggcggcgaacgccgccatc
cgcaaacatcagaaggatggccccgaggcgcagcaggcggccctggagcgtctgggtttc
cagccagaccaggcaaaagccattttgaccccggatgtcatgggaaccgtgggttttgcg
tcgtactccctcagcaacaataacgccaacatccggcggctggaagagcgtattcagatc
ctggaaaaggcccaggccctgaaggaccgtgagacaccgtatgcctggggaacggttcgg
gagaacagggagatcaaccgcatccagttccggttcgaggacaagcctgacgaagaggtc
cgcaatctcatgaagtcgagcggctttcgatgggcgccttccgagggcgcctggcaacgg
cagtggacgggcaatgccgtatatgccgcgcgggatgtcatcaaaaagctggacgcgctg
atgccgcctgagcagacggtggcagcaccagaaccggcccaacggctcgacactgtgccg
gtttcccagagccctgatgtgagcccaggtattactgtccgcgacccgagcgccgcgctg
tctgcggccatcaaggaccgcgacggcgactggtacaacctttccgtgcaggaaaacgat
ggccgtctggtggggaccttgcagcggcgcgatgcggaaacgggtctggtggagacgatg
ccagccggtgtttttcagcctgacgtgaattatggggtggtggccaagtttgagcgcgag
tccggggaactcctggcggttggcctttcccgtggtcgggatggcggtgtggatatgaag
gtcttttcccagtcgagggacgccgcagtcttcgcctggcagcgaattcatgagtacccg
ggacatctgcgggccaatgaagcgctccagaaggtcccggatcacccggagggcaaggtg
attgagcaggctttgggcgtggacctgaagacgctcaacccggcgcgtgttgctcccaag
gcctcagcccgccggccggagcagcagaagcagcagggtgtggagatatag
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integrated database retrieval system
