Acinetobacter ursingii: URS_1538
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Entry
URS_1538 CDS
T06299
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aug
Acinetobacter ursingii
Brite
KEGG Orthology (KO) [BR:
aug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aug03032
]
URS_1538
03400 DNA repair and recombination proteins [BR:
aug03400
]
URS_1538
Enzymes [BR:
aug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
URS_1538
DNA replication proteins [BR:
aug03032
]
Prokaryotic type
DNA Topoisomerases
URS_1538
DNA repair and recombination proteins [BR:
aug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
URS_1538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Toprim_C_rpt
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BBF77543
LinkDB
All DBs
Position
1:1573862..1576507
Genome browser
AA seq
881 aa
AA seq
DB search
MANAPRSTSKKSTAASSESAANKRALVIVESPAKAKTINKYLGSQYIVKSSVGHVRDLPT
GGSAKSSEKKPATRAKLTAEEKEQKAQTALINRMGVDPEHDWKAHYEVLPGKEHVVAELK
KLASQVDEVYLATDLDREGEAIAWHLKEVIGGDDSRYQRVVFNEITKNAIQEAFKHPSRL
DTNKVNAQQARRFLDRVVGFMISPLLWEKIARGLSAGRVQSVAVKLVVEREREIRAFIPE
EYWQIFADTTSKKDDIRLEAFKQAGKTLKLRNKAETDAVLHLLKDAEYKVAQREDKPTKV
NPSAPYITSTLQQAASTRLGFSVKKTMMLAQRLYEGGFITYMRTDSTFLSDDAVNMVRDH
IQQNFGDKYVPAKPNRYGNKAGAQEAHEAIRPSSVALTGDQLAGMERDAQRLYDLIWRQF
VACQMTPAEYLSSTLTVEANNVELRAKGRTLVFDGFTRVRGANKSDDDVLLPAVKVGEIL
KLEKLDPSQHFTKPPARFTEASLVKELEKRGIGRPSTYAAIISTIQDRGYVKLENRRLFA
EKMGEIVTDRLDESFNNLMNYAFTADLEGQLDRVATGDRNWKELLDSFYGDFKNRLNTAA
SAEGMRRNQPVEVPSVACQLCGRPMQIRTGTTGVFLGCSGYNLPPKERCKGTLNLTPVES
LAAFSDDDSAETADLMSKHRCAKCGTAMDSYVIDGGRKLHVCGNNPDCDGYEVEEGEFKI
KGYDGPTIPCDKCDGEMQLKTGRFGPYFACTSCDNTRKVLKNGQPAPPRVDPIKMEHLRS
TKHDDYFVLRDGAAGLFLAASKFPKIRETRAPKVAELRTVADQLDPKYQYLLQAPDVDPE
GNPTLIKFSRKNQAQYIGSETPEGKQTKWSLLYQDGKWAEA
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgcccctcgatccacaagcaaaaaaagcacggcagcatcttctgagtctgct
gcaaacaaacgtgccttagtgattgtggagtcgcctgcaaaagcgaaaaccatcaacaaa
tatttaggttcacaatacattgtgaagtcttcggtgggtcacgtgcgtgatttaccgaca
ggtggttcagccaaatccagtgaaaaaaaaccagcaacacgtgccaaactgactgccgaa
gaaaaagagcaaaaagcacaaacggcactgattaatcgtatgggcgtagatcctgaacat
gactggaaagcacattatgaagtgctaccaggcaaggaacacgtagttgcagagcttaaa
aaactggcttctcaggtcgatgaagtttatctcgcaacggacttggaccgtgaaggagaa
gccattgcttggcatttaaaagaggtgattggcggtgatgacagtcgttatcaacgtgtg
gtgtttaatgaaatcactaaaaatgccattcaggaagcttttaagcatccttcacgtctc
gataccaataaagtcaatgcacaacaggcacgtcgttttctagatcgtgtcgtaggcttt
atgatttctccactcctttgggaaaaaatcgcccgtggtttatcagcaggacgtgttcaa
tcggtagccgttaaattggtggttgagcgtgaacgtgaaattcgtgcttttatacctgaa
gaatactggcagatttttgcggacaccacttcgaaaaaagatgacattcgtctggaagcc
tttaagcaagcgggaaaaaccttaaagctacgcaataaagctgaaacagatgcagttctt
catcttctgaaagatgcagaatataaagtcgcgcagcgtgaagataagccaaccaaggtt
aatccaagtgcgccgtatattacgtcgaccttgcaacaagcagcgagtactcgtcttggc
ttttcagtgaaaaagaccatgatgttggcacaacgtctgtatgaaggcggctttatcacg
tatatgcgtaccgactccacttttttaagtgatgatgcggtgaatatggtacgcgatcat
attcagcaaaattttggcgataaatatgttcctgccaagccaaaccgttatgggaataaa
gcgggtgcgcaagaggcgcatgaggcgattcgaccttcaagtgtcgcgctaacaggagat
caacttgcaggaatggagcgagatgcacagcggttatatgatttgatttggcgacaattt
gttgcttgtcaaatgacacctgctgaatatttatcttcaaccctgacggtagaagccaac
aatgtcgagttacgtgccaaaggacgtactttggtatttgatggtttcaccagagttcgt
ggtgccaataaatcggatgatgatgtattactcccagcagtaaaagtgggtgaaattctt
aagcttgaaaagcttgatccaagtcagcattttaccaaaccccctgcacgatttaccgaa
gcctcactggtcaaagaacttgaaaaacgcggaattggtcgtccatcgacttatgctgcg
attatttcaaccattcaagatcgtggttatgtgaaactggaaaatcgtcgcctatttgct
gaaaaaatgggtgaaattgtcaccgatcgtctggatgaaagctttaataatctgatgaat
tatgcttttaccgcagatctggaaggtcaacttgaccgtgtggcaacaggagatcgtaat
tggaaagagttgctcgatagtttttacggtgactttaaaaatcgtttaaataccgcggct
agtgcagaaggtatgcgccgtaatcaacctgttgaagttcctagtgttgcctgtcagtta
tgtggacgacccatgcagattcgtacaggtactacaggcgtatttttaggttgttctggc
tataatcttccaccaaaagaacgttgtaaaggcaccctgaatctgacaccagtcgaatca
ttagctgccttttccgatgatgattcggcggaaactgctgatctgatgtctaagcatcgc
tgtgcaaaatgtggtaccgcgatggatagttatgtgattgatggcggtcgcaaattacat
gtttgtggtaataatccagactgtgatggctatgaagtcgaagaaggcgaattcaaaatc
aagggctatgatggtccaaccattccatgtgacaaatgtgatggtgaaatgcaattaaag
acaggccgctttggcccatactttgcctgtaccagttgtgacaatacacgtaaagttttg
aaaaatggacaacctgcaccaccgcgtgttgatccgattaaaatggaacacttgcgttcg
actaaacatgatgattattttgtgttgcgtgatggagcagcaggtttgtttctagcagcc
agcaagttcccgaaaattcgtgaaactcgtgcgccgaaagttgcagaactacgtactgtt
gcagatcaacttgatccaaagtatcaatatttgcttcaagctcctgatgttgatccagaa
ggtaatccgacgttgatcaagtttagccgtaaaaatcaggcacaatacattggttctgag
acgccagaaggtaaacagactaaatggagtctgctgtatcaagatgggaaatgggctgag
gcttaa
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