Aerococcus sp. Group 1: HMPREF9243_0463
Help
Entry
HMPREF9243_0463 CDS
T01447
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aur
Aerococcus sp. Group 1
Pathway
aur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF9243_0463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aur03019
]
HMPREF9243_0463
03009 Ribosome biogenesis [BR:
aur03009
]
HMPREF9243_0463
Enzymes [BR:
aur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HMPREF9243_0463
Messenger RNA biogenesis [BR:
aur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMPREF9243_0463
Ribosome biogenesis [BR:
aur03009
]
Prokaryotic type
rRNA helicases
HMPREF9243_0463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AEA01652
UniProt:
F2I7M4
LinkDB
All DBs
Position
458977..460503
Genome browser
AA seq
508 aa
AA seq
DB search
MKFEELNLDPRLLQAVKNMGFEETTPIQAQTIPYALEGRDVLGQAQTGTGKTAAFGLPLL
EKIDHHTEHIQALVIAPTRELAIQNGQELYRLGKEKGVRTVNVYGGANIRRQIHQIKKGA
PVVVGTPGRLIDLMKRKVLNLNFIETLVLDEADEMLNMGFIEDIETIIRATPSNRQTLLF
SATMPKEIQRIGEHFMQDPVTVKIEAKEMTADTIDQYFTKCHDREKFDLLTRFIDVSHAK
LAIVFARTKRRVDEVSRGLIERGYQAEGIHGDLSQEKRSSIMKDFKDGRLEILVATDVAA
RGLDISNVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSITFVSNHEMGYLRTIENLTHK
KMSPLRPPTEEEAFTGQIKQSLAAVEELLEEDRDDQYEEVVNYLSENYTAEQLALAVVRS
QMKDKNDVKVSITPERPLGRKRSDKSRGKSHSKNRGQHKGRNHHSKPRPKNNKGQGKSKH
TGNKKRSQAKKHNKPAKNQSNKQSFTIH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaagaattgaatttagatcctagactgctccaagcggtcaagaatatgggc
tttgaagaaaccacccccatccaagcacaaaccattccctacgccttagaaggacgggat
gttttaggtcaggctcaaaccggtaccggaaaaaccgctgcttttggcctacccctctta
gaaaaaatcgaccaccataccgaacatatccaagccttagtgatcgcgccaacccgggaa
ttagccatccaaaatggccaagaactttaccgcctgggtaaggaaaagggcgtccgcacg
gtcaatgtttacggtggggctaatatccgccggcaaattcatcaaattaaaaaaggcgct
cccgtcgttgtgggaacacccggccggttaatcgatttaatgaaacgcaaggtcttaaac
ttaaactttatcgaaaccttggtcctagatgaagccgatgaaatgcttaacatgggcttt
atcgaagacattgaaaccattattcgtgccactccgtctaaccggcaaaccttgctcttt
tcggccaccatgcccaaggaaatccaacgcattggtgaacacttcatgcaagacccggta
acggtcaaaatcgaagctaaggaaatgaccgcagataccatcgatcaatactttaccaag
tgccatgaccgggaaaaatttgatcttttaacccgctttattgatgtcagccatgccaaa
ctggctattgtttttgcccggaccaaacgccgggtggatgaagttagccggggactgatt
gaacggggctaccaggctgaaggcatccatggggacttatcccaggaaaaacggtctagc
attatgaaggactttaaagacggtcgtttggaaattttagtggctactgatgtggcggct
cgtggtttagacatcagtaatgtgacccatgtctataactatgatatcccccaagaccct
gaaagctatgtccaccggatcggccggaccggacgggcaggtaagggcggcatgtccatt
actttcgtctcaaatcatgaaatgggttacctgcgtacgattgaaaacctaacccataaa
aaaatgtctcccctccgtccaccaacggaagaagaagctttcacgggtcaaatcaagcaa
tctttagctgcggttgaggaactcttagaagaagaccgtgatgaccaatacgaagaagtg
gtgaactacctcagcgaaaactataccgctgaacaattagccttggccgtggttcgctca
caaatgaaggataaaaatgatgtcaaggtgtccatcactcctgaacggcctttagggcgg
aaacgttccgacaaaagccggggcaagtcccactctaagaaccgaggccagcataagggg
agaaatcaccactctaagccaagacctaaaaataataagggccaaggcaagtctaagcac
accggcaacaaaaaacgcagccaggctaagaaacacaataagccggctaaaaaccaatcc
aataagcaatcatttaccattcattaa
DBGET
integrated database retrieval system
