Trichormus variabilis: Ava_1493
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Entry
Ava_1493 CDS
T00277
Name
(GenBank) Small GTP-binding protein domain protein
KO
K13730
internalin A
Organism
ava
Trichormus variabilis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
COR
LRR_1
Roc
Ras
LRR_6
Arf
Gtr1_RagA
MMR_HSR1
Beta_helix
MMR_HSR1_Xtn
MnmE_helical
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
ABA21116
CyanoBase:
Ava_1493
UniProt:
Q3MD20
LinkDB
All DBs
Position
1837892..1841215
Genome browser
AA seq
1107 aa
AA seq
DB search
MTQDELLILIEQAATEGWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRY
LKKVSGNNLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPE
AIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILF
SNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANL
TNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKIT
EIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKITQIAEAIAKLTNLTE
LHLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEAIAKLTNLTELHLDGNQITQIPEA
LESLPKLEKLDLRGNPLPISPEILGSVYEVGSVEEIFNYLRLLRSGEVRPLNEAKLLLIG
QGSVGKTSLIERLIHNKYDKNQPQTNGLNVETWNVQVNSKDIRLNVWDFGGQEIYHATHQ
FFLTKRSLYLLVCNCRTSEEENRIEYWLKLIESFGGQSPVIIVGNKKDEQPLDINRKALR
EKYPNIQAIIETSCQDNIGIDELRTSIFQQVANLKEVYDLLPLSWFEVKQQLESMPQDFI
TYNRYIGICHENKIPEEQDQDQLIDLLHRLGLVLNFRDHPILKDTNVLKPNWVTEGIYAL
LSDETLKTKSKGIFTPADLTRILNPERYPTKRHDYLIELMKEFELGFALECYPPQFLIAG
LLPKDQPDATGLEGETLEFQYHYKVLPESIISRFIVKTHERIYNQIYWRSGVMLQYQEHN
EIYNIARIKADPEDKKIFIAISGRKETRRLFLAILRDVFQQIHKSLPNLEITEWVPVPKH
PNHPTLDYQELLGLESMGETTITIGKLKLKLDLRQLLDGYESLESRRKSQKDDPESDLVR
INIYNNNHQGDFKPMTENKNNFQGAQVGIVNIGNEVKDKASQQVGDLTQTSGANINEIIQ
LINNLRQTVAQFPPASRDDIIIDIDDVEVEIQKPEKERNTPKLKKRLVALLTAASVAAAP
IASVADFTNNVMELGSKLGIELIHPSP
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggatgagttgttgatactgatagagcaagcggctactgagggttggcgagag
ttggatttatctggacaagagttgactgagttacctggggaaattggtaagttgcagcag
cttgagtctttgattttgggaaagcaggttggtggttatgaatgggtaggagaccgctat
ctcaaaaaggtttcaggcaacaatttaaaaacgcttccactcgaattattgggtttgcct
aatttgcgtaagttggatattagtggcaatcctttagagcgtattcctgatctggtaacg
caaatactacatttagaggaactaatcttaattcgagtagagataaccgagataccagag
gcaatagcgaatttaaccaatctgacgcatcttatcctcttttccaaccaaataaccgag
acaccagaggcgatcgctaaattaaccaatctgacgcagcttgacctcagtgacaaccaa
ataaccgagataccagaggcaatagcgaatttaaccaatctgacgcatcttatcctcttt
tccaaccaaataaccgagataccagaggcaatagcgaatttaaccaatctgacgcagctt
gacctcggtgacaaccaaataaccgagataccaaaggcaatagcgaatttaaccaatctg
acgcagcttgacctcggtgacaaccaaataaccgagataccaaaggcaatagcgaattta
accaatctgacgcatcttatcctcttttccaaccaaataaccgagataccagaggcaata
gcgaatttaaccaatctgatgcaacttgacctcagttacaaccaaataaccgagatacca
aaggcaatagcgaatttaaccaatttgacgcagcttgtcctcagtgacaacaaaataacc
gagataccagaggcaatagcgaatttaaccaatctgacgcaacttgacctcagtgacaac
aaaataaccgagataccagagacaatagcgaatttaaccaatctgacggagctttacttc
aattacaacaaaataacccagatagcagaggcaatagcgaaattaaccaatttgactgag
cttcacctcagttccaaccaaataacccagataccagaggcaatagcgaatttaaccaat
ctgacggagctttacctcaattacaacaaaataacccagatagcagaggcaatagcgaaa
ttaaccaatttgactgagcttcacctcgatggcaaccaaataacccagataccagaggcg
cttgaaagtttgccgaaattggaaaaactagatttacggggaaatccgcttcctatttca
ccagagattttaggatctgtctatgaagttggttcagttgaagaaattttcaattacttg
cgattactgcgtagtggtgaagtacgtccactcaacgaagccaagctcttgctcatcgga
caaggcagcgtcggcaaaacatccctcatcgagcgactaatccacaataaatatgataaa
aatcaacctcaaaccaacggactcaatgtagaaacttggaatgtgcaggtcaatagcaaa
gacatccgtctcaatgtttgggactttggcggacaggaaatttatcatgctacccatcag
ttttttctgactaagcgcagtctctatctcctagtctgtaattgtcgtaccagcgaagaa
gaaaaccgcatcgaatattggctgaaactaatcgaaagcttcggcggacagtccccggtg
attatcgttggcaataaaaaagatgaacaacccctcgacatcaaccgcaaagcattacgg
gaaaaatatcctaacatccaagcaattatcgaaacttcctgccaagacaatatcggcatt
gatgaacttcgtacctccattttccagcaagttgccaacctcaaagaagtctacgacctt
ctacccctttcatggtttgaggttaaacagcaactcgaatccatgccccaagacttcatc
acctacaaccgctacatcggcatctgtcacgaaaacaagattcccgaagaacaagaccaa
gatcaactcatcgacttgctgcatcgactcggcttagttctcaacttccgcgatcatccc
atcctcaaagataccaacgtccttaaacctaattgggtgacagaaggaatttacgcactt
ctgagtgatgaaaccctcaaaactaaaagcaaaggcatttttacccccgccgatctcacc
cgcatcctcaatccagagcgttaccctaccaagcgtcacgactatctgattgaactgatg
aaagaatttgagcttggctttgcgctagagtgttacccaccacaattcctgattgcggga
cttctccccaaagaccaaccagacgcaacaggactagaaggtgaaaccctagaatttcaa
taccattacaaagttctgcccgaaagcatcatttcccgcttcatcgtcaaaacccacgaa
agaatttataaccaaatctattggcgcagtggcgtaatgctgcaatatcaagaacacaat
gaaatttacaatattgctcgcatcaaagctgaccccgaagacaaaaaaatcttcatcgcc
attagcggacgtaaagaaacccgccgcttatttcttgctattctccgcgatgtcttccaa
caaatccacaaaagtctccccaacctggaaatcaccgaatgggttcccgttcccaagcat
cccaaccacccgaccctcgactaccaagaacttctgggactcgaatcaatgggtgaaacc
acaatcaccatcggcaaactcaagcttaaactcgatttgcgtcaacttttagatggttac
gaatcactagaatcacgccgaaaatcacaaaaagacgatccagaaagcgatctggttaga
atcaatatttacaataacaaccatcagggagattttaaacccatgacagaaaataaaaac
aactttcaaggcgcacaagtaggtatcgtcaacattggcaacgaagtcaaagacaaggcc
agtcagcaagttggtgacttaactcaaacaagcggcgcaaacataaacgaaattatccaa
ttaatcaacaacctacgccaaactgtagcccaatttccgccagcaagccgcgacgatatt
attattgatattgatgatgtagaagtagaaattcaaaagccggaaaaagaacgcaataca
ccaaaacttaaaaagcgtttggtggctttactaactgccgcgagtgtagctgctgccccg
atcgcaagtgtggcagactttacaaataatgttatggaactcggcagcaaattaggcata
gagctaattcaccctagtccttga
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