Trichormus variabilis: Ava_4885
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Entry
Ava_4885 CDS
T00277
Name
(GenBank) PAS/PAC sensor signal transduction histidine kinase
Organism
ava
Trichormus variabilis
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Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_3
HATPase_c
PAS
PAS_9
PAS_8
HisKA
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
ABA24482
CyanoBase:
Ava_4885
UniProt:
Q3M3F4
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Position
6149364..6152279
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AA seq
971 aa
AA seq
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MTDNLVTIDKNTYDSLQQELIGLRQVVAKTLQLGLLIEYIPAAIAIFDSEMRYLLASRRW
REDYDLVDENIVGRSHHDVCPEITLGWQNRYECCLAGNTEKSEEETLIRRDGTIDWVKWE
INPWYEPSGEVGGLAVVSEVITPRKQSDIALADSERRLRDTEARLQRLADNLPGMLYEFC
LKPDGTMTFPYVSSGCRELIERSPQELQDDASLIFANTHPEDMIGLQEAIANSAKTLQNF
EYEWRIITSSGQIKWVQGVSRPERQPGGEITWYGYLLDISEQQAVLRERKQADQQLQQQA
QLLQSIWEGVDYGICVLDVLDDEAEFRYVKINPAMHRISLLPVASFIGKTTAESLPPEIA
DLYRQRYQQCIKSRKSLVFEDNFLVNDKETWWFVNITPLGDSNSQISQLVVTATEITERK
QAEQERQLFVSLIENSSDFIGFATLAGKPLFLNEAGLKLVGLDGLDALKNLHIMDFFFPE
DQEYMDKHIMRVVNERGLWQGEYRFRNYQTHEEIPVDFNIFTVKSSETGKPLCLATVTRD
IQERRKVEALLQEQEQFLRNIYEGVDQIIFVVDVLENLDFCYTGWNSTAERYTGITRNDA
IGKAPEDIFGSVEGSLVRQRYKNCVEAGVSISFEDCLTFHNQETWWLTKINPLKNSAGRV
YCLVGTTLDITQRKQNEIQLRQQAENLENTLRELQLTQTQLIHSEKMSSIGNMVAGVAHE
INNPVNFIHGNLIPASEYAQDLLQLVELYRLHFPYPPEEIQEFIIDIEFDFLKEDLVKLL
QSMRIGTQRIREIVLSLRNFSRLDEAEFKQVDIHEGIDSTLMILQNRLKAKSDHPEILVV
KSYGDLPLIDCYPGQLNQVFMNLISNAIDALEEPVVDGQLSVAKPTIYIRSEMFNNNWVR
VTISDNGVGIPQEILSKLFDPFFTTKSVGKGTGLGLSISYQIVVDRHNGKLTCNSTPGQG
AEFIIEIPIHQ
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaatctcgtgactatagataaaaatacttatgattctcttcaacaggaactc
ataggactacgccaggtagtagcaaagactttacaactagggttattgattgagtatata
cctgcggcgatcgctattttcgacagtgagatgcgctacttgctggctagtcggcgctgg
cgagaagactatgacttagttgatgagaatatcgtcggtcgttctcatcatgatgtttgt
ccagaaatcactttgggttggcagaacagatacgagtgttgtttggcgggaaatacggag
aaatctgaagaggaaactctgatccgtcgggatgggactattgattgggtgaaatgggaa
ataaatccttggtatgaaccatcaggtgaggtgggtggtttagctgttgtctctgaggta
attaccccacgcaaacaatcagacattgctttagccgatagtgaaagacgtttaagagat
acggaagcacggttgcagcgtctagctgataatctgccagggatgctttatgaattttgc
ctgaaacctgatggcaccatgactttcccttatgtttcttctgggtgtcgagaactgata
gaacgcagtccccaagagttacaggatgatgcctcgctcatttttgccaatactcatcct
gaggatatgatagggctgcaagaggcgatcgctaactctgccaaaactctgcaaaacttt
gaatatgagtggcgtattatcacttcttctggtcagataaaatgggttcaaggagtctcc
cgaccggaacgtcagccaggaggcgaaatcacttggtatggttatctattagatataagc
gaacagcaagccgtacttcgtgaacgcaagcaagcagaccaacaattgcaacagcaagca
cagttgttacaaagtatatgggaaggtgtagattacggtatctgtgtcttggatgttttg
gatgatgaggcagagtttcgttacgttaaaataaatcctgccatgcaccgcattagtctc
ttgccagttgcatcttttattggtaaaacaacggcagagtcactgccacctgaaattgcc
gatttatatcgccaacgctatcaacaatgtatcaagtctcgaaagagcctagtcttcgag
gataatttcttagttaacgataaagaaacttggtggttcgtcaatattacaccccttggt
gatagcaattcacaaatttcgcaactcgtagtgacagcgacggaaattacagaacgcaaa
caagctgaacaagaacggcaattgtttgtctctctgattgaaaatagcagtgactttatt
ggttttgcgactttagcaggaaaaccattatttctgaatgaagctggacttaagttagtt
ggtcttgatggtttagacgctctgaagaatctccatattatggattttttcttcccagaa
gatcaagaatatatggataaacacattatgcgggtggtaaatgagcgtggtttatggcag
ggtgaatatcgtttccgcaactatcagactcatgaagaaataccagttgattttaatata
tttactgttaaaagctcggagactggtaagcctttgtgtttagcaacagttactcgtgat
attcaggaacgtagaaaagtagaagcattactgcaagaacaagagcaatttttacgtaat
atttatgagggtgttgatcaaattatctttgtggttgatgttttagaaaacttagatttt
tgttataccggttggaactcaacagcagaaagatatacaggaattactcgaaatgatgct
attggtaaagcacctgaggatatttttggcagtgttgaaggttctttagtccgtcaacga
tacaaaaactgtgtggaggctggtgttagcatttcttttgaagattgtttaactttccat
aatcaagaaacttggtggttaactaaaattaatcccctgaaaaatagtgctggtagagtt
tattgtctagttgggacaactttagatattacacagcgcaaacaaaatgaaattcaattg
cgacagcaagccgaaaatttagaaaacactctgcgtgaattacaacttacccaaactcaa
cttatccatagtgagaaaatgtcttccattgggaatatggttgcaggtgtagcccatgaa
atcaataatccagttaactttattcacggtaatttgattccagccagtgaatatgctcaa
gacttgttacagctagtagaactttatagactccactttccctatccgccagaagaaatt
caggaattcattatagatattgagtttgatttcctcaaggaagatttggttaagctgctg
caatctatgcgtataggaacccaacgcattcgagaaattgtcttatcactccgcaatttt
tcccgccttgatgaagctgaatttaagcaagtagatattcatgaaggtatcgatagtacg
ctcatgattttacaaaatcgcctaaaagctaagtcagaccatccagaaattttagtcgtt
aaaagttatggtgatttacctttgattgattgttatcctggtcagttaaatcaggtattt
atgaaccttatcagtaatgctattgatgctttagaggagccagtagttgatggtcaattg
tcagttgctaagcctacaatttatattcgtagcgaaatgtttaataataactgggtgcga
gttaccatatcagataacggtgtagggattcctcaagaaatcttatcaaaactatttgac
ccatttttcacgactaagtctgtgggtaagggaactggcttaggtttatctattagttat
caaattgttgtggatagacacaatgggaaattaacttgcaactcgacacctggacaagga
gcagaatttatcattgagattcccattcatcagtga
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