Archaeoglobus veneficus: Arcve_0032
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Entry
Arcve_0032 CDS
T01451
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ave
Archaeoglobus veneficus
Pathway
ave03410
Base excision repair
ave03430
Mismatch repair
ave03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Arcve_0032
03430 Mismatch repair
Arcve_0032
03440 Homologous recombination
Arcve_0032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ave03400
]
Arcve_0032
DNA repair and recombination proteins [BR:
ave03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Arcve_0032
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Arcve_0032
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Arcve_0032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AEA46075
UniProt:
F2KMQ1
LinkDB
All DBs
Position
28742..30274
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AA seq
510 aa
AA seq
DB search
MTKNILALIIVIHSVLIGDMHPLFLMQPLLHFRTTRKLYFLVRRLIDVDLAKYKEMLRKA
YEVALMLKKQEEVLVVTHVDADGITSGSIALQALERAGIEGNILFVKQLDPSTIEQVADR
NVFTWFTDLGSGQLDLIAEKKIECVITDHHVPQGHYRLQLNPNDFGVDGAHELGGAPTTY
LVAKSMGLNYDLVSLAIVGAVGDLQDSRHGKLIGLNRLVLQEGVEGNFISAFRDLRLFGK
QTRPVYKMLEYTFDPYLPGISGNEKAALELLESLGISPKDGEFWRRWIDLSYEEKVALTS
ELVKLCMEAGYPVSTIKRLVGETYIMLHEEEGTELRDAMEYSTLLNATARYGHEDVGLKV
CLGDRGEALRRARTLLQNHRRNLSEGLKLVDEIGIVELDNIQYFHAEDKILDTIVGIVAG
MCFSKANLRKPIIAFANNSEGVKVSARATQRLVEMGVHLANALRIAAEKVGGKGGGHSIA
AGALIPAGCEKEFLRELDRIIGGQLAKCRS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaatattttggctttaataatagtaattcattccgttctcataggagatatg
catcctctgtttctaatgcaacccctacttcactttcgcaccactcgcaagctttatttt
ttagtaaggagattgattgacgtggacttggcaaaatataaggagatgctgagaaaagcc
tacgaagttgccttaatgctaaagaaacaggaggaagtccttgtcgtcacccacgttgac
gctgatggaatcacatccggctccatagccctgcaggccctcgaaagggcaggaattgaa
ggcaacatcctctttgtcaaacagctcgacccctcgacgattgagcaggttgccgacagg
aacgttttcacatggtttacggatttgggcagcgggcaactcgatctgattgcggaaaag
aaaatagaatgtgtcatcacagaccaccatgtcccccaagggcactacaggctccagctc
aaccccaacgactttggcgttgatggtgcacacgagcttggaggggccccaacaacatac
ctcgtggcaaagagcatggggctgaactacgacctcgtaagtctggcaattgttggggct
gttggcgaccttcaggactcaagacacggaaaacttatcggtcttaacagactcgttctc
caggagggagtagaggggaattttatctccgccttccgcgatctgaggctcttcggaaag
cagacgagacccgtatacaagatgctcgagtacacattcgacccctacctgccggggatc
agcggaaacgagaaggccgccttagaacttcttgaaagcctcggcatatcacccaaagac
ggcgaattctggaggcgctggatcgatttaagctacgaggaaaaggtcgctctaacttca
gaacttgtcaagctttgcatggaggctggctaccctgttagcacaataaagaggctcgtc
ggcgaaacgtacattatgctgcatgaggaagaaggaacggagctaagggacgcgatggaa
tattcaactctcctcaacgctaccgcgaggtacggtcacgaagacgttggcctgaaagtt
tgtcttggtgatagaggtgaagcgttgagaagggccagaacactcctccagaaccaccgc
aggaacctttccgaaggactgaaactcgtcgacgaaataggaatcgtcgaacttgataac
attcagtacttccatgcggaggataaaatactggacaccatcgtcggcatagttgctgga
atgtgcttcagcaaggcgaacctgagaaagccaattatagccttcgccaacaatagcgag
ggcgttaaggtttctgcaagagcgacacaaagactcgtagaaatgggcgtccatctggca
aacgcgcttcgcatcgctgcagaaaaggtaggtggaaagggaggcgggcacagcattgca
gccggagctctgataccagctggctgcgagaaagagttcttgagggaacttgatagaata
ataggcgggcagcttgcaaagtgcagaagctga
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