Agrobacterium vitis VAR03-1: RvVAR031_03840
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Entry
RvVAR031_03840 CDS
T08810
Symbol
secB
Name
(GenBank) protein-export protein SecB
KO
K03071
preprotein translocase subunit SecB
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf02024
Quorum sensing
avf03060
Protein export
avf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RvVAR031_03840 (secB)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RvVAR031_03840 (secB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RvVAR031_03840 (secB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
avf03110
]
RvVAR031_03840 (secB)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
avf02044
]
RvVAR031_03840 (secB)
Chaperones and folding catalysts [BR:
avf03110
]
Other chaperones and cochaperones
SecB
RvVAR031_03840 (secB)
Secretion system [BR:
avf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RvVAR031_03840 (secB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecB
Motif
Other DBs
NCBI-ProteinID:
BCH52774
UniProt:
A0A125P2C9
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All DBs
Position
1:complement(433342..433803)
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AA seq
153 aa
AA seq
DB search
MANENSNGAESPSLNILAQYIKDLSFENPGAPRSLQARDKAPSININVNVNANPLSDNDF
DVVLSLTAEARDDDKVVFAAELVYGGVFRITGFPQEHMLPVLFIECPRLLFPFARQIIAD
ATRNGGFPPLMIDPIDFAQMFAQRFAEEQGRVN
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgaaaacagcaatggggcggagagcccgtccctgaatatccttgcacaatat
atcaaggatctgtccttcgaaaatccgggtgcgccgcgctcgctgcaggcccgggacaag
gccccttcgatcaatatcaatgtcaatgtcaacgccaacccgctgtcggacaatgatttc
gacgtggtcctgtcgctgaccgcagaagcgcgcgacgacgacaaagtggtttttgcagcc
gaattggtctatggcggcgtcttccgcattaccggttttccgcaggaacacatgctgccg
gtgctgttcatcgaatgcccgcgcctgctcttcccgtttgcgcgccagatcatcgccgat
gccacgcgcaatggcggtttcccgccgctgatgattgaccccatcgattttgcgcagatg
tttgcccagcgctttgccgaggagcagggccgggtcaactga
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