Agrobacterium vitis VAR03-1: RvVAR031_16650
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Entry
RvVAR031_16650 CDS
T08810
Symbol
gatC
Name
(GenBank) glutamyl-tRNA(Gln) amidotransferase subunit C
KO
K02435
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:
6.3.5.6
6.3.5.7
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00970
Aminoacyl-tRNA biosynthesis
avf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RvVAR031_16650 (gatC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
avf03029
]
RvVAR031_16650 (gatC)
Enzymes [BR:
avf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
RvVAR031_16650 (gatC)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
RvVAR031_16650 (gatC)
Mitochondrial biogenesis [BR:
avf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RvVAR031_16650 (gatC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatC
Gta3
GatF
Motif
Other DBs
NCBI-ProteinID:
BCH54055
UniProt:
A0A1S2E6L5
LinkDB
All DBs
Position
1:1827643..1827930
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AA seq
95 aa
AA seq
DB search
MSVDLATVKRVAKLARIALPEDEAERVMGELNGILGFVEQLSEVNVDGVEPMTSVMPMAM
RKRKDAVTDGGKADDIVANAPETDRHFFLVPKVVE
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttgatctcgccaccgtcaagcgtgttgccaagcttgcccgtattgctctgccc
gaagatgaggctgaacgggtgatgggggagttgaatggcattctcggttttgtcgagcaa
ttgtcggaagtgaatgttgatggcgtcgaaccgatgacctctgtcatgccgatggcgatg
cgcaagcgcaaggacgccgttaccgatggcggcaaggccgatgatatcgttgccaatgcg
ccagaaactgaccgtcatttcttcctggtaccgaaggttgtcgaataa
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