Agrobacterium vitis VAR03-1: RvVAR031_31820
Help
Entry
RvVAR031_31820 CDS
T08810
Name
(GenBank) NAD-dependent epimerase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00053
Ascorbate and aldarate metabolism
avf00520
Amino sugar and nucleotide sugar metabolism
avf00541
O-Antigen nucleotide sugar biosynthesis
avf01100
Metabolic pathways
avf01240
Biosynthesis of cofactors
avf01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
RvVAR031_31820
00520 Amino sugar and nucleotide sugar metabolism
RvVAR031_31820
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RvVAR031_31820
Enzymes [BR:
avf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
RvVAR031_31820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
KR
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
BCH55572
UniProt:
A0A6S6MVQ0
LinkDB
All DBs
Position
1:3487583..3488602
Genome browser
AA seq
339 aa
AA seq
DB search
MRYFITGTAGFIGFHLARRLLQDGHTVTGYDGMTAYYNLRLKEARNAGLAQFPSFTGVIG
MLEDREALERAVDQAKPDVIIHLAAQAGVRYSLENPKAYLDSNLIGSWNIVEIARQLQIG
HLMLASTSSIYGANPQVPFRETDRADEPMTFYAASKKGMELMAHSYAHLYKVPTTAFRFF
TVYGPWGRPDMALFKFMKAMLADEAIEIYGEGKMSRDFTYIDDLIDSVIALSAIAPGEEN
RVSTPENLDTLSHNAPFRVINIGGGQPIALMDFIETIETIMGRPTKRKMLPMQQGDVPRT
FASPDLLVALTGQKPTTTLDVGVKATMDWYLEHYRQLGL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctatttcatcaccggcactgctggcttcatcggctttcatctggcccgccgtctg
cttcaggatggccataccgtcaccggctatgatggcatgaccgcctattacaatttgcgt
ctcaaggaagcccgcaacgccggtcttgcccagtttccaagctttaccggcgtgatcgga
atgctggaggaccgcgaagcgcttgagcgggccgtggatcaggccaagcccgacgtcatc
atccatctagctgcccaggcgggcgtacgctacagtctcgaaaacccgaaagcctatctg
gattcaaacctgatcgggtcctggaacattgtcgagatcgccaggcaattgcagatcggg
catttgatgctggcctcaacttcatcgatttacggtgccaatccgcaggttcctttccgt
gagaccgaccgcgccgacgaaccgatgaccttctatgccgccagcaagaagggcatggag
ctgatggcgcacagctatgcccatctctacaaagtgccgaccacagccttccggttcttc
acggtctacggtccctggggtcgtccggatatggcgctgttcaagttcatgaaggcgatg
ctggccgatgaagccatcgagatctatggcgaaggcaagatgagccgcgatttcacctat
atcgacgacctgatcgacagtgtcatcgcgttgtcagccattgcccctggcgaggaaaac
cgggtcagcaccccggaaaacctggatacgctctcccataacgcgccgttccgcgtcatc
aatatcggcgggggccagccgatcgcgctgatggatttcatcgagaccatcgagaccatc
atgggccgcccgaccaagcgcaaaatgctgccgatgcagcagggcgacgtgccacgcacc
ttcgccagccccgacctgctggtggcgctcaccggccagaagccgacaaccacactggat
gtcggcgtcaaggcgaccatggactggtatctggagcattatcgccagcttgggctgtga
DBGET
integrated database retrieval system