Agrobacterium vitis VAR03-1: RvVAR031_35650
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Entry
RvVAR031_35650 CDS
T08810
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00362
Benzoate degradation
avf01100
Metabolic pathways
avf01120
Microbial metabolism in diverse environments
avf01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RvVAR031_35650 (pcaB)
Enzymes [BR:
avf01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
RvVAR031_35650 (pcaB)
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GFIT
Motif
Pfam:
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
BCH55955
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All DBs
Position
2:331744..332802
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AA seq
352 aa
AA seq
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MSISPFEHSFLSGLFGDEAFAALFAGQADIAAMLSFEAALAKAQGEAGVIEPGDATAIQS
GLARFTADLDALKTATARDGVVIPELVSQMRKAIGGESAAKLHFGATSQDVIDTSLVLRL
KMAAELLDQRLAALIAGFEQLDAAFGQNALMGHTRMQAAIPITVSDRIAAWVGPLHRHRF
RLRALLADGFALQFGGAAGTLEKLGDKGPAVRARLAELLGLQDAPQWHSQRDRIVALADL
LSLISGSLGKFGQDVALLAEMGGEIQLTGGGGSSAMPHKQNPVGAETLVTVARFNSVQIA
GLHQSLVHEQERSGAAWALEWLLLPQMVVATGAATKTGLQLIGAIARLGKSA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccccatttgaacactccttcctttccggcctgtttggcgatgaggctttt
gcggccttgtttgccgggcaggcggatattgctgccatgctgtcctttgaggcggcgctg
gccaaggctcaaggtgaggccggggtgattgagccgggggatgccacggcgatccagtcg
ggccttgcccgtttcacagcggatctcgatgccttgaaaacggccacggcacgcgatggc
gtggtcattccagaattggtaagccagatgcgcaaagccatcggcggggaaagcgctgca
aaattacatttcggcgccaccagtcaggatgtcatcgataccagcctcgtgctgcgtctg
aagatggccgctgaactccttgatcagcggctggcggcattgatcgccgggttcgagcaa
ctcgatgctgcatttgggcagaacgctttgatgggccatacccgcatgcaagcggccatc
ccgattacggtttcagaccggatcgcggcctgggttggacctttgcaccggcaccgcttc
cgtctacgggctttgcttgccgatggttttgccctgcaatttggcggtgcggcaggaaca
ttggaaaagctcggcgataaaggacctgcggtgcgcgccagactggctgaactgcttggt
cttcaggatgcgccgcaatggcatagccagcgcgaccggatcgttgcccttgccgatctt
ctgtcacttatctcagggagccttggtaaattcggtcaggacgtagcgcttctggcggaa
atgggtggtgaaattcaattgaccggcggcggcggctcctcggccatgccgcataagcaa
aaccctgtcggtgcggaaacgctggtgacggttgcccgtttcaattccgtacagattgct
ggcctgcatcaaagccttgtccatgaacaggaacgatctggcgctgcctgggctttggaa
tggttgctgctgccgcagatggttgtggcgacaggggccgccacaaaaaccggtctacaa
ttgatcggagccatcgcccggcttggcaaatctgcctga
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