Agrobacterium vitis VAR03-1: RvVAR031_42130
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Entry
RvVAR031_42130 CDS
T08810
Name
(GenBank) trehalose synthase
KO
K05343
maltose alpha-D-glucosyltransferase / alpha-amylase [EC:
5.4.99.16
3.2.1.1
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00500
Starch and sucrose metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RvVAR031_42130
Enzymes [BR:
avf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
RvVAR031_42130
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.16 maltose alpha-D-glucosyltransferase
RvVAR031_42130
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
Mak_N_cap
TCAD9
DUF3459
Motif
Other DBs
NCBI-ProteinID:
BCH56563
UniProt:
A0A6S6MYW1
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Position
2:complement(1012256..1015558)
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AA seq
1100 aa
AA seq
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MEQQQQQAETDPLWYKDAIIYQLHIKSFYDGNGDGIGDFKGLTEKLDHIASLGITAIWIL
PFFPSPRRDDGYDIADYGNVSPDYGTMDDFRAFVDAAHARDMRVIIELVINHTSDQHPWF
ERARNAPAGSPERDFYVWSDTDQKFPETRIIFLDTEKSNWTWDPVAGAYYWHRFYSHQPD
LNFDNPVVLDELITVMRFWLDTGIDAFRLDAIPYLVEREGTNNENLPETHAILKKIRAAM
DEGHPGKMLLAEANQWPEDTQEYFGDGDECHMAFHFPLMPRMYMAIAKEDRFPITDIMRQ
TPEIPDNCQWAIFLRNHDELTLEMVTDAERDYLWNTYAADRRARINLGIRRRLAPLMERD
RRRIELMNALLLSMRGTPVIYYGDEIGMGDNIYLGDRDGVRTPMQWSPDRNGGFSRADPA
RLVLPPLMDPLYGYEAVNVEAQSADAHSLLNWSRHMLALRRKFTAFGRGTLRFLSPANRK
IIAYLREYEGEVLLCVANLSRLPQAVELDLAEFEKRIPIELTGMSAFPPIGQLTYLLTLP
PYGFFWFKLSGETDADGPTWRTEPPEQLPDFVTIVMRRELPQLLDEATIQNTISQEILPA
YLAKRRWFASKGERVKRASLISTIPMPFGNDLLLGELETELEDRIERYFLPFAIAWDDEN
PHALAQQLAFARVRKGRRVGFLTDGFAMQSMARGVIRALRERSSISSKSGSIDFIGTEQL
DGMDLSEDMQVKWLSAEQSNSSLIIGDLAMIKLIRHIHQGIHPEVEMTRHLTRLGYANTA
PLLGEVVRVSPEDERSTLIIIQGAIRNQGDAWTWMLDTLRQTLEQSMVAGQDDDVEQERF
NPLFNQAAVIGKRLGELHVALAKPTDDPAFAPVAMRDEDVSVWARSVMARVADCLDRVSA
IAHGSDSDGLDTETNRVSTMLADRREQILSAVGTLASGAKDTLMIRNHGDFHLGQILIAE
DDVYIIDFEGEPARPLAERRAKTNPLRDVAGLIRSLSYLAASGDTGREIVVQGDSAARAA
LIEAFRKKAETHFLESYFAAVDGEPTLAMDPEQRRRILDLFLLEKAAYEIGYEASNRPGW
IAIPLAGFADIAERLTETSL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcaacagcagcaggccgagacggatccgctttggtataaggatgcaattatc
tatcaattgcacatcaagtccttttacgatggcaatggcgatgggatcggcgacttcaag
ggcttgacggaaaagctcgaccatatcgcctcgcttggcattaccgccatctggatactg
ccgttctttccctcgccgcggcgcgatgacggctacgacatcgccgattacggcaatgtc
agcccggactatggcacgatggacgatttccgcgccttcgtggacgccgcccatgcccgt
gatatgcgcgtcatcatcgaattggtgatcaaccatacgtccgaccagcatccgtggttt
gagcgggcccgcaatgcgcccgccggttcgccggaacgggatttctatgtctggtcggat
accgaccagaagtttccagaaacccggatcatctttcttgacaccgaaaagtccaactgg
acctgggacccggtggcaggcgcctactactggcaccgcttctattcccaccagccggac
ctcaactttgacaatcctgtcgtgctggacgaattgatcacggtcatgcggttctggctc
gataccggcatcgatgccttccggctcgacgccattccctatctggttgagcgcgaaggc
accaataacgaaaacctgccggaaacccatgcgatcctgaagaagatccgcgcggcaatg
gacgaaggccatccgggcaagatgctgttggccgaggccaatcaatggcctgaagatacc
caggaatattttggcgatggcgacgaatgtcacatggccttccacttcccgctgatgccg
cgcatgtatatggcgattgccaaggaagatcgctttccgatcaccgatatcatgcgccag
acacctgagattccggataattgccaatgggcgattttcctgcgcaatcacgacgaactg
acactggaaatggtgacagacgccgagcgggattatctgtggaacacctatgccgctgac
cgccgcgcccgcatcaatctcggcattcgccgccggttggcgcccctgatggagcgtgac
cgccgccgtatcgagctgatgaacgcgctgcttctgtcgatgcgcggcacgccggtgatc
tattatggcgacgagatcggcatgggcgacaatatctatctcggcgaccgtgacggggtg
cgcaccccgatgcaatggtcgccggatcgcaatggtggcttttcccgtgccgacccggct
cgtctggtcctgccgccgttgatggaccctctctatggctatgaggcggtcaatgtcgag
gcacagtcggctgacgcccattcgctgctgaactggagccgccatatgctggcgcttcgg
cggaaatttaccgcgttcggacgcggcacattgcggttcctgtcgccagccaaccgcaag
atcatcgcctatctgcgtgaatatgaaggcgaagtgctgctgtgtgtcgccaatctgtcg
cgcctgccgcaggcggtcgagctggatctggccgaattcgaaaagcgtattcccattgag
ctgacaggcatgtcggcctttccccccatcggccagctgacttatctcctgaccctgcca
ccctatggtttcttctggttcaagctgtcgggcgagacggatgcggacgggccaacctgg
cgcaccgaaccgccggagcaattgccggatttcgtcaccatcgtcatgcggcgcgaactg
ccgcaattgctggacgaggcaaccatccagaacacgatttctcaggaaatcctgcccgcg
tatcttgccaagcgccgttggtttgcctcgaaaggcgaaagggtcaagcgcgcctcgctg
atttcgaccattccgatgcccttcggtaatgacctgctgctgggcgagttggaaaccgag
ctggaagatcgcattgagcggtatttcctgccgtttgctatcgcctgggacgatgaaaat
ccccatgcgcttgcccagcaactggcctttgccagagtgcgcaaaggacgccgggtcggc
tttctgacagatggctttgccatgcaaagcatggcgcgcggcgtgatcagagcgttgcgc
gaacgctccagcatttccagcaaaagcggctccatcgatttcatcggcacagagcagctc
gacggcatggatctgtccgaggacatgcaggtcaaatggctctcggctgaacaatccaac
agttcgttgatcatcggcgatctcgcgatgatcaagcttatccgtcacatccatcagggc
atccacccggaagtggaaatgacccgccacctgacacggcttggctatgccaacaccgcc
ccgctgctgggagaggtcgtcagggtttcaccggaagatgagcgctcgacattgatcatc
attcagggcgccatccgcaatcagggcgatgcctggacctggatgctcgacaccctcagg
cagacgctcgaacaaagcatggtggccggtcaggatgacgatgtcgagcaagagcggttc
aacccgctgttcaatcaagcagccgtgatcggcaaacggcttggggaactgcatgtggca
ctggccaagccaacagacgacccggcgttcgcgccagtcgcaatgcgtgatgaggatgtg
tccgtttgggcgcgctcggtcatggcccgcgttgccgactgcctggacagagtgtccgca
attgctcatggcagcgacagtgatggtctcgacactgaaaccaacagggtcagcaccatg
ctggcggaccgccgcgagcagatcttgagcgcggtcggcacgctggccagtggtgccaag
gacacgctgatgatccgcaaccacggtgatttccatctgggtcagatcctgattgccgaa
gacgatgtctatatcatcgattttgaaggcgaaccggcccgtccgctcgccgaacgtcgg
gcaaagaccaatccgctgcgcgacgtggccggattgatccgctcgctgagctatcttgct
gcttccggcgatacgggccgcgagatcgtcgtccagggcgacagtgcagcaagagccgcg
ctgatcgaagcctttcgtaagaaggccgagacgcacttcctcgaaagctatttcgcggca
gtggacggagagcccacactggccatggaccccgaacagcgccgcaggattctcgacctg
ttcctgctggaaaaggccgcctatgaaatcggctatgaagccagcaaccggccaggctgg
atcgccattccactcgctggctttgccgacattgccgaacggctgacggagacttcccta
tga
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