Agrobacterium vitis VAR03-1: RvVAR031_42640
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Entry
RvVAR031_42640 CDS
T08810
Name
(GenBank) hypothetical protein
Organism
avf
Agrobacterium vitis VAR03-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FabA
ketoacyl-synt
Ketoacyl-synt_C
KAsynt_C_assoc
ACP_syn_III
Acyl_transf_1
Thiolase_N
Motif
Other DBs
NCBI-ProteinID:
BCH56614
UniProt:
A0A6S6MYR7
LinkDB
All DBs
Position
2:1084785..1091894
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AA seq
2369 aa
AA seq
DB search
MSRIAITALSLCFPGANDLDSYWRNLLAKNDSRSTGGVKDFRIDPFYLRDSQEDVDQVRW
LRGGFVDLDEVTKELAEEAGNGLDLPWQLARRVAEEALQTSRLGERVDLGRVGMVLGNYT
FPTFASNNAVVPVWEREIAAGLEEGLGIAPGTLADRPLTAPPAEHGVLSADGIYAVTRGL
QLGGPSFSLDAACSSSLYAIELASSYLRSGHADAMLAGGVCLPDPWLIHVSFGDLGAFPN
NGVSQPFDSTSDGIVTGQGASVVVLRRLEDALRDNDIILAVIESVGLSNDGTGQHMLVPN
ADGQRLAYQRAYARTGVQPEEIDYVECHATGTPLGDRTELTSLQRFFGADKQHFPLIGSV
KANVGHLLTVAGMSSLAKVILAMQEGTIPATPGIGKLQKSMDAPGMEQRLVVENQSWPTP
AGKRHAAISAFGFGGTNAHMIVSDDRTISGKRTQKDNGAAKTLQPPPLEIRGMAAHYGNA
ASLQAFEAASFGGEPVWAEPSSRRWRGAAVTADTPPQAAINAYDIDFLRNRIPPAETEAF
NAQQGLVLKVANEALSDAGYGHIGEKRSARPVAVLVVLELDLSAHLRRGRTLVPDWIDQA
LAGQGLHLSEEERQGLIEACKRAVLGPLRSTEITSYIGNICASRIASQWNFTGPVFTLSA
GMLGVAYAMEQAGLMIADDKAEAALIVAVDLNAGLEAYALELAGSPAAKSQASKSLGDGA
GAILLAPAGFGASAAPYAVLDHISIRHMGKGEDSAIAVALATIADGYSLDLMDMAGQVGG
NGSELAAVAAHAPGAVVCGVEHLSGHCKVAQPMAALIRAALCLSGRYLPATPPAWLNAEV
NQPLAVAIEQAGLGLLAESVPWVRQERSRPLVAGVGAAGPFGSYAAFRLSEAVVETLRQP
EADYPPFLPVAAESREALVGVLGTVIAALEQGIAWQALQTEALANLRERPSARVLVLSGR
DPAQLLTEARQAQKFLGEGQGVEFQTPSGSYFTDRPQGAEGKIAFMYPGGFNSYPHLGRT
LLRRYPDSLRAFEQFVDDPTATLCHDQLYPRHKPGQDATVRLMQTEAGMQQDIAAMMKTG
VGFALMYTTLLRDQFGVQAHGAIGYSMGEVSMLFANGIWPIDQHGLRNDLPLFETSIGGP
RQAVRDTFDIGPEVRDNQVWSSYVLLAPVETVRDAIATRSDVFITHVNGPKEVVIAGLPA
AVTALVKQLEGYSAYRSPVSHVLHVPLLQRVAHQISALHDHPTTAPPDNLHLYTTSTYGR
MTDFSREGLSRTITDVMCSEVDFVRLVDKAYDDGYRIFIECGPSATCSRWVNSCLTGRDY
LSINLNQRGADDGRSLLAALARLVSHGVRVDLTSLVPGAKAERSKTVISLQPGGAALRAT
ASDTIRPLETKPAVSQPFKPSTIARSVAWGPTAAFILEGTSFVHELLDDDTQDEIQPDYQ
PARPSPGLPSLSPKHVEADQPFMAKNITISQDKSQRIAQAVEAFLQRQRLGHQTFLQTQS
DLVQIWREHAGNGAHGNGAHGVRPAQRSLPHPATIDAAPAVLEIEAPQPVALAPAPVAPT
PAPVAVASVLPASAREKQEKGWFLDEQDLLTFASGKVADALGAQFAPIDDYPVRVRLPAP
PYFFVSRVTKVDATFGEYKPCSLTTEYDVPADAWYLIDGQMPPGIAVESGQSDLLLVALL
GIDFKNKGVRKYRLLDGRLSFYGRLPQAGSTLRFDITIDRFVWQGDGLLFFFRYDGYVDG
ELALQLHSGCAGFFTEDELNAGGGVVIKQPPAAPLTLVKPLLPRVRDTLEKSDLVALSEG
RIGEVFGPGSQHPESGSSIRLPPEMLLMIDRVTDIGSWQGEHYVMEAEKSFDADGWYYTS
HFVDDPVLPGSLIAEGATQLLKVYLIANGMHQCFADGVFEPVTHREMQITVRGQITPDVK
KVHYKLFIQESALLPRPYVIADVLIYDEHGKPLVRVSNLGLQVVEKPGVSVEPRFGDPTW
FSGRKTKSGEKVVLNEMSMHHAAKGELRIGLGPEFNIYGEELRAPHIPNGCFQFVDRCLE
TTGTRGQLVPGAVMDTEYDAAADSWYFQENSHPHIPNFVVLESALQAAILNGYALGPTLK
YPDKEYSIRNLDGTAVYLSDPDVRGTTIRHSQKLLSNAMVTDSILQNFDFNLKVDGQPFY
QGQSSFGYFTKRALENQLGLDQGKLSRFWLEDNSAKAEEFDLLNPASAHLFAGTQDKPHW
CLPPGHRFRLLHQASLVRDGGKFGLGYVKGERTIDAGEWYFTNHFHRDPVMPGSLGLEAI
LQAMQLFAIQTGLDAGIANPRFGIAVGVPVNWRYRGQLLRTDKRMGLEVHIKEIRREGEG
LVVIADTDLFNDRLRIYEALSMSISIKPA
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcatcgcgatcaccgccctgtcgctctgctttccaggtgccaacgacctggat
agttactggcgcaacctccttgctaaaaacgactcccgctcgacgggcggggtcaaggac
ttccggatcgaccctttctatctcagggatagtcaggaggatgtcgatcaggttcgctgg
ctccgcggtggcttcgttgatctggacgaggtgaccaaggaacttgcggaggaggctggc
aacggcctcgatctgccctggcaattggcccggcgcgtcgccgaagaggccctccagacc
agcaggcttggtgagcgggtggatcttggccgggttggcatggtcctcggtaattatacc
ttcccgacctttgcctccaacaacgccgttgtgccggtctgggagcgggaaatcgccgca
gggctggaagaggggctagggattgctccgggaacattggccgaccggcccttgacggcg
ccaccagccgaacatggcgtactgagtgcagatggcatctatgccgtaacgcgtggcttg
cagcttggcggcccgagcttcagccttgacgccgcctgttcttcctccctctacgcgatc
gaacttgcctccagttatctgcgaagcggacatgcagatgccatgctggcgggcggtgtt
tgcctgccggatccctggctgatccatgtctccttcggcgatctgggcgcttttcccaac
aatggcgtcagccaacccttcgacagtacgtcggatggcatcgtcacgggccagggggcc
agcgttgtcgtgctgcggcggctggaagatgcgttgcgcgacaatgacatcatcctcgcc
gtgatcgaaagcgtcggcctgtccaatgatggcactggccagcatatgctggttcccaat
gccgatggccaacggctggcctatcagcgcgcctatgcgcgcacaggcgtacagcctgaa
gaaatcgattacgtcgaatgccatgccaccggcacgccgcttggcgaccgcacagaactg
acatcgctgcaacgctttttcggtgcggataagcagcatttcccgctgatcggttcggtc
aaggccaatgtcggccatcttctgactgtggcgggtatgagcagtctggccaaggttatc
ctggccatgcaggaaggcaccattccggccacgcccggcattggaaaactgcaaaaaagc
atggacgccccgggcatggagcagcggctggtggtcgaaaaccagagctggccaacgcct
gccggaaaacgtcatgcggccatttccgccttcggctttggcggtaccaatgcgcatatg
atcgtctccgatgaccgcacgatttcagggaaacggacgcagaaggataacggcgcggca
aaaacgctccaaccaccgccgctggaaatccggggcatggccgcccattacggcaatgcc
gccagtctccaggcctttgaagcggcgtcctttggcggcgaacctgtctgggcggaaccg
tccagccgccgctggcgcggcgctgctgtgactgccgatacgccgcctcaagctgcgatc
aatgcctatgatatcgacttcctgcgcaaccgtatccctcctgcggaaaccgaagccttc
aacgctcagcaaggactggtgctgaaggtggccaatgaggcgctgtccgatgctggctat
ggccatatcggcgaaaagcgctccgcccgccctgtggctgtgctggtggtgctggaactg
gatctgagcgctcacttgcgccggggccgcacgctggtgccggattggattgaccaggcg
cttgcgggccaaggtcttcacctcagtgaggaggagcgccaaggcttgatcgaggcgtgc
aaacgcgctgttctggggccacttcgctccacggaaatcaccagttatatcggcaatatc
tgtgctagccgcattgcctcgcagtggaatttcaccggacctgtcttcacgctttcggct
ggaatgctgggcgttgcctatgccatggaacaggccgggttgatgattgccgatgacaag
gcggaagcagcgctgattgtcgcggtcgacctgaatgccgggctcgaagcctatgcgctg
gaactggctggctctccggctgcaaaatcccaagcttctaagtctttgggtgatggtgca
ggcgcgatcctgctggcgcccgccggttttggggcgagtgctgccccctacgcggttctt
gatcacatctctatccgtcatatgggcaaaggtgaggacagtgccattgcagttgcgctg
gcgaccattgccgatggatacagccttgatctgatggatatggccggacaggtcggtggc
aatggttcggaactggcggcggttgccgcccatgctcccggcgccgttgtctgcggcgtt
gaacatttgagcggtcattgcaaggttgcccaaccgatggccgccttgatccgggccgcg
ctatgcctgtcgggccgctatcttccggccacgccaccggcctggctgaatgcggaggtg
aaccagcctttggcggtcgccatcgaacaggccgggcttgggcttctggccgaaagcgtg
ccgtgggtgcgccaggagcggagccgtccgcttgtggcgggcgtgggcgctgccggaccg
ttcggcagctacgccgccttccgtctcagtgaagcggttgtggaaaccctgcgccagccg
gaagctgattacccaccctttctgccggtcgcagccgagagccgagaagccctcgtgggt
gttctggggacggtcatcgcggcgcttgaacagggaatagcctggcaggcactgcaaacc
gaagccttggccaatcttcgtgaaaggcccagtgcaagggtgttggtcctatccggtcga
gacccggcgcaattgctgacggaggcccgtcaggcgcagaaattcctgggtgaaggccaa
ggggtggagttccagacgccatcgggcagctattttaccgaccggccccagggcgcagag
ggcaagatcgccttcatgtatcccggtggtttcaacagctatccgcatctgggacgcaca
ttgctgcgtcgttaccccgacagcctgcgcgctttcgagcaattcgtcgatgatccgacg
gcaacgctctgccatgatcagctctatccgcgccacaagccgggtcaggacgcgactgtg
cggttgatgcagaccgaagccgggatgcagcaggatatcgcggcgatgatgaaaaccggt
gtcggtttcgccctgatgtataccaccttgctgcgggaccagttcggtgtgcaggcccat
ggtgcgatcggctattccatgggcgaagtcagcatgttgtttgccaatggcatctggccg
atagaccagcatggcttgcgcaacgacctgccactgttcgagacctcgattggcggcccc
cgtcaggcggtgcgcgacacattcgatattgggcctgaggtccgcgataatcaggtctgg
tcgagctatgtgctgcttgctccggtggagacggtccgcgacgcgatcgccactcgttca
gatgtgttcatcacccatgtgaatggccccaaggaagtggtgattgccggtctgcccgca
gcggtaacggcattggtcaagcaattggaaggctattccgcctatcgcagcccggtctcg
catgtcctgcatgtgccgctgctgcaaagggtggcgcatcagatttccgccctgcacgat
catccgaccacagcaccaccggacaatctgcatctttataccacctcgacctatgggcgg
atgacggatttcagccgtgaaggcctgtcgcggaccattaccgatgtgatgtgctctgag
gtggatttcgtgcggctggtcgataaggcctatgacgatggctaccggatcttcatcgaa
tgcggtccttcggccacatgcagtcgctgggtgaattcatgcctcacaggtcgggattat
ctgtcgatcaatcttaaccagcgtggggccgatgatgggcgcagcctgcttgcggctctt
gcccggttggtttctcacggtgtcagggtcgatcttaccagcctggtgcctggggcaaag
gccgagcgctccaaaacggttatcagcctgcaaccgggcggtgccgcgctgcgcgcaact
gccagtgatacgatcaggccgctggaaaccaaacccgctgtgtcgcagccattcaaaccc
agcactatcgcaaggtctgttgcttggggaccgacggcagccttcatcctcgaaggcacc
agctttgtccacgaattactggacgacgacacccaggacgaaatccagccggactatcag
ccagcaagaccaagtcccggtcttccatctctttccccgaaacatgtcgaagcggatcaa
ccattcatggccaagaatattaccatcagccaggataagtctcagcggatcgcccaggct
gtcgaagcctttttgcagcgccagcgcctcggccatcaaacgttcctgcaaacccagtcc
gacctcgtgcagatctggcgcgagcatgccggaaatggcgcacacggaaatggggcacat
ggggtacggccagctcagcgtagcctgccccatccggcaaccattgatgccgcgcctgcc
gtattggaaatcgaggcacctcagcctgtcgcccttgcgcctgcacccgttgcgcctacg
ccagcacctgttgccgtggcctccgtgttgcctgccagcgcccgtgaaaagcaggaaaag
ggctggtttctggacgaacaagatctgttgacctttgccagcggcaaggttgccgatgcc
ttgggcgcgcaatttgcgccaattgatgattatccggttcgggttcgtctgccagcgcca
ccttatttcttcgtgtcgcgcgtcaccaaggtcgatgccacgttcggggaatataagcct
tgctcgctgacaacagaatatgatgttccagccgatgcctggtatctgatcgacggccag
atgccacccggcatcgcggtggaatccggccagtccgatttgttgctggtcgcgttgctg
ggtattgatttcaagaacaagggtgtccgcaaataccggcttctggatggtcggttgagc
ttttacggtcgtctgccgcaggcgggcagcacgctgcgttttgacatcaccatcgaccgg
ttcgtctggcagggcgatggcttgctgttcttcttccgctatgacggttatgtcgatggt
gaactggccctgcaattgcacagcggttgcgccggtttcttcaccgaggacgagctgaat
gccggtggcggcgttgtcatcaagcaaccgcccgcagccccgctgaccctggtcaaaccc
cttctgccacgggtccgcgacacgctggaaaaatccgatctggtggcgctgtccgagggc
cggatcggcgaggtcttcggccccggttcgcagcatccggaaagcggcagctccattcga
ctgccgcccgaaatgctgctgatgatcgaccgtgtcaccgatatcggctcctggcagggc
gaacactatgtcatggaggccgaaaagagctttgacgccgatggctggtattatacctcg
cattttgttgatgatccggtcctgccggggtcgctgatcgccgaaggcgcaacccagctg
ctcaaggtctatctgatcgccaatggcatgcatcaatgctttgccgatggggtgtttgag
ccggtcactcaccgggaaatgcagatcacggtccgtggccagatcacccctgacgtgaaa
aaggtccactataagctgttcattcaggaaagcgccctgctgccgcgtccctatgtgatt
gccgatgtgttgatctatgatgagcatggcaagccgctggtgcgtgtgtccaatctgggc
ttgcaggtggtggaaaagcccggcgtctcggttgagccgcgctttggcgatccgacctgg
ttcagcggacgcaaaaccaagagcggtgaaaaggtcgtgctcaatgaaatgagcatgcac
cacgcggccaagggcgaattgcgcatcggtctcggcccggaattcaacatttacggcgag
gaattgcgcgccccgcatattccgaatggttgcttccagttcgtcgatcgctgcctggaa
accactggcacgcgcggccagttggtccccggtgccgtgatggataccgaatatgatgcg
gctgccgacagctggtatttccaggaaaacagccatccgcatatcccgaatttcgtggtg
ctggaatcggcgcttcaggccgccattctgaatggctatgcactggggccaaccctgaaa
tatcccgataaggaatattcgatccgcaatctggatggcacggcggtctatctttccgac
ccggatgtgcgcggcacgacgatccgccacagccagaaattgctcagcaatgccatggtg
acggattcgatcctgcaaaacttcgacttcaacctgaaggttgatggtcagcctttctat
cagggccagtcttctttcggctacttcaccaagcgggcgctggaaaaccagcttggcctt
gaccagggcaagctcagcaggttctggctggaggacaacagcgcgaaagccgaggaattc
gatcttctgaacccggcctccgcccatctgtttgctggtacacaggacaagccccattgg
tgcctgccgcccggccatcggttccggctgctgcatcaggccagcctggtgcgcgatggt
ggcaaatttggcctcggctatgtcaagggcgagcggacgattgatgcgggcgaatggtat
ttcaccaaccatttccaccgcgatccggtcatgcccggctcgcttggattggaggccatc
ctgcaagccatgcagctctttgccatccaaacaggtttggacgcggggattgccaatcca
cgcttcggcattgcggtcggcgtgccggtcaattggcgctatcgcggccaattgctgcgc
actgacaagcgcatgggcctcgaagtgcatatcaaggaaatccgccgggaaggcgaaggt
ctggtggtgattgccgataccgatttgttcaatgaccggctgcgtatctatgaagcgctg
tcgatgagcatttccatcaaaccggcctaa
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