Agrobacterium vitis VAR03-1: RvVAR031_pl04600
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Entry
RvVAR031_pl04600 CDS
T08810
Name
(GenBank) integrase
KO
K07497
putative transposase
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
RvVAR031_pl04600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_21
rve_2
rve_3
HTH_33
NdhN
Motif
Other DBs
NCBI-ProteinID:
BCH57129
UniProt:
A0A6S6N078
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Position
pRvVAR031a:complement(500089..501000)
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AA seq
303 aa
AA seq
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MQVSTRGYRAWASRPTCQRARTDLKLLAHIREQYTLSRGTYGRPRMTMELKEVGLEVSER
RVGRLMKINGIRPIRTRRHKVTTDSQHHLGVAPNLLDGDFLAAAPNQKWAGDISYIWTTE
GWIYLAVVIDLFSRRVVGWAVSDRMKTDLAIRALEMAINLRQPPKPPKGCIFHSDRGSQY
CSYDFQKKLQVHGVRPSMSGKGNCYDDAAVETFFKSLKAEVLWRQTRPTRRKAETAIFQY
INGFYNPRRRLSYLGGISPSLSKPRWHSEIGDRHNSVTSPVCICETRFAREMSGWPSLGA
IVT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggtgtccacgcgcggctatcgggcctgggcgtcgcgccccacctgccagcgtgct
cgcacagatctgaagctgctggcgcacatccgcgagcaatataccttgagccgtggcacc
tatggcaggcctcggatgaccatggagctcaaagaggtgggacttgaagtgagcgagcgt
cgtgtgggacggctgatgaagatcaatgggatacggcctattcgcacacgccgccacaag
gtcaccaccgatagccagcaccaccttggcgttgctcccaatctgctggacggggatttt
ctggctgctgcgcctaaccagaaatgggcgggcgacatcagctatatctggaccactgag
ggctggatctaccttgcggtcgtcatcgatctgttcagtcgtcgcgtggttggttgggct
gtcagcgaccggatgaagacagacctggcgatccgagccttggaaatggccataaacctg
cgtcagccacccaagccacccaagggatgtattttccattccgatcgcggcagccaatat
tgctcctacgacttccagaaaaagctgcaggtccacggcgtgcggccatcgatgtcaggc
aagggcaactgctatgatgatgctgcggtcgagaccttcttcaaaagcctgaaggcagag
gtactctggcgtcagactaggccaaccagacggaaggcagagaccgccatcttccagtac
atcaacggcttctacaatccacgtaggcgcctttcatatctgggcggcatcagcccctcg
ctttcgaagccaaggtggcatagtgagatcggtgaccggcacaattccgtgacaagtcca
gtctgcatctgcgagacgcgtttcgctcgggagatgtctggctggccaagtctcggcgct
atagtgacctga
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