Apaloderma vittatum (bar-tailed trogon): 104272949 Help Entry 104272949         CDS       T08559                                  Symbol RC3H2 Name (RefSeq) roquin-2   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism avit  Apaloderma vittatum (bar-tailed trogon) Brite KEGG Orthology (KO) [BR:avit00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:avit03000]     104272949 (RC3H2)    04121 Ubiquitin system [BR:avit04121]     104272949 (RC3H2) Transcription factors [BR:avit03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     104272949 (RC3H2) Ubiquitin system [BR:avit04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     104272949 (RC3H2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4_3 Prok-RING_4 zf-C3HC4 zf_CCCH_4 zf-C3HC4_4 zf-C3HC4_2 Xin zf-RING_10 Motif Other DBs NCBI-GeneID:  104272949 NCBI-ProteinID:  XP_009866370 LinkDB All DBs Position Unknown AA seq 1195 aa AA seqDB search MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVSSTVPTTTGNVISVI GSPEATGKMVPSTNGIANLESGVPQLIPRCADTSLRALENTKKGGKTGANGQNVSGSPTE SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFGTEFSESVSDLSGTKFEEDHLSHYSPW SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDST SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD EGSRLTLNLLSKEIDLRNGEVKKGTDFTEDCADTKPDRDIELELSALDTDEPDGQGEQIE EILDIQLGINSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVT SCFSQPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS NT seq 3588 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc tgcctgaacaaactgcatcgcaaggcatgtcctttcgaccagactgccatcaatacggac atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacccgat catcagacagtaaagctgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc ttgaatcagagtgcactgagccgtcccatgcaaaggaagcttgtgacactggtgaattgt cagctcgtagaggaggagggtcgggtccgagccatgagggcagctcgatcactgggagag agaaccgttacagaactgatcttgcagcaccaaaatcctcagcagctttctgccaatctt tgggctgctgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca ctgaaacttgtgttactggcactggaagatggctctgcactctccagaaaagttctggta ctttttgttgtgcaaaggctagaaccaagattccctcaggcctctaaaacaagcattggt catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat tcttctctgatgcaacttaaagaagagtttcggagttacgaggctttgcggagagaacat gatgcccaaattgttcacattgccatggaagcaggacttcggatatcaccagagcaatgg tcttcccttctttatggtgacttggcccataaatcacacatgcagtccattattgacaag ctccagtctccagagtcttttgcaaagagcgtccaagaattgacaattgtcttgcagcgt acaggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata gatccaaatccagatgcagcgtctccaacatgggagcagctggaaaatgcaatggtcgct gtaaagactgtggtacacgggttggtggatttcattcagaattacagcagaaaaggccat gaaactccacagccacaaccaaatagcaaatataaaacaagtatgtgccgagaccttcga cagcaagggggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt gaaaaatatcgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccactgcta aataaagttggcgtcagtagcaccgtcccaaccacaacaggaaacgtaatttctgtcata ggaagccctgaagcgacagggaagatggtgccgagcactaatggaatagctaatctagaa agtggtgttccccaactgatccctcgctgtgcagacacctccttgagagcgctggagaat accaagaagggagggaagaccggagccaatggccagaatgtttctggatcccctacagaa tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc ccgtttgttcccagagtacctgtctaccctccacattctgacaatgttcaatatttccaa gatcccaggactcagctgtcctatgaagttccgcagtacccgcagacaggatattatcca ccacctccaacagtaccagctggtgtggctccttgtgttcctcgctttgtgaggtccaat aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtacg tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga ccagttcctcctgtcccttctggaatgtatgctccagtgtatgacagcaggcgcatctgg cgcccacagatgtaccctcgagatgatattattaggagcaattctttacctcccatggat gtgatgcactcatctgtctatcagacatcgttgcgtgagagatacaactctttggatggg tattactctgtggcttgtcagcctccaaacgaacagaggactgtgcctttaccaagggag ccttgtggtcatttgaagactggttatgatgagcaattaagacggaagccggagcaatgg gcacagtaccacacacagaaaactcctctggtatcgtcaacccttcctatggcaacaccg tctccaacaccgccttctccactcttcagtgtagatttcggtacagagttctcagagagt gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt gccaattcaaatgccgtgttaatggatttggacagtggggatgttaaaagaagagtgcat ttatttgaaactcagagaagagcaaaggaagaagatcctataatcccatttagcgatgga ccgatcatctccaagtggggtgcaatctccaggtcatcccgcacgggttatcacacgaca gatcctattcaggccactgcttcccaaggaagtgctactaagcccatcagcgtatcagat tatgtcccttatgtcaacgctgttgactcaagatggagtgcatacggctcagattctact tcctcagcacgttatgcagaacgggacagattcatagttacagatttgtctggtcacaga aagcattccagcactggagatctactgagtattgagttacagcaggccaaaagtaactca ttattgcttcagagagaggcgaatgcactagccatgcagcagaagtggaattctctagat gaagggagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag gtaaagaaagggactgattttactgaagactgtgcagacacaaagccagatcgcgacatt gagctggagctgtcagcccttgatacagatgaacctgatgggcaaggcgaacaaatagaa gagatcctggatatacagctaggcatcaattctcaagacgatcagctgctcaatggaaca actgtagagaatgggcatcctctaaagcagcaccagaaagaatctatggaacagaagaga caaagtttaggtgaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaact tcttgcttcagtcagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagc acatcagtcagtgttggcagtctcattttgaaaactgctcacattatgtctgaggataaa aatgactttttaaagcctgttgcaaatggcaggatggttaacagctga

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