Apaloderma vittatum (bar-tailed trogon): 104273044
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Entry
104273044 CDS
T08559
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104273044 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104273044 (FIP1L1)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104273044 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
104273044
NCBI-ProteinID:
XP_009866537
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
ENEAERPEEEKASVPPPPGSEEEASENGVVKTKVAEAEADSDSDSDDDEDDVQVTIGDIK
TGAPQYSYGAAPVNLNIKTGGRAYGSSGAKVKGVDLDAPGSINGVPLLEVDLDSFEDKPW
RKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEILPVTSTTSKITVQQGRTGNLEKEL
AVQSSKAEFTSPPALFKSGIPANRRLPGTIDVIGQTITISRVEGRRRANENSNIQVLSER
SNPEVDNFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPP
PGGPPPSLIPTIESGHSGYDGRSVRAFSYGNVTFPHLAGSAPSWSSLMDTSKQWDYYARR
EKDRERERERSRDRDRDRDRDRDRDRERTRDRERERDHSPTPSVFNSDEERYRYRDYAER
GYDRHRTSREKEDRHRDRRHREKEDTRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKE
GKEASSEPAPEQENTEAAPVE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gaaaatgaggcagagagaccagaggaagaaaaagctagtgttccacccccacctggaagt
gaagaggaagcgtcagaaaatggcgttgtgaaaacgaaggtggcagaggctgaggctgac
agtgatagtgatagtgatgacgatgaagatgatgttcaagtcaccataggggatattaaa
acaggagctccacagtatagttatggagcggcacccgtgaatcttaatattaagacagga
ggacgagcttatggatcttctggtgcaaaagttaaaggggtggatctagatgcaccaggg
agtattaatggtgtgccacttctggaagtagatttagattcttttgaagataaaccttgg
agaaagccaggggctgatctctctgactatttcaactatggcttcaatgaagatacctgg
aaggcttactgtgaaaaacaaaagagaatacgaatgggtcttgaaattttaccagttacc
tcaaccacaagtaaaattacggtacagcagggcagaactggaaatttggagaaagagttg
gcagtgcagtcgtccaaagctgaattcacgtctcctcctgccttattcaaatcaggaatt
ccagcaaacaggcgattacctggcacgatagatgtgattggacagaccatcaccatcagc
agggtggaaggacgacggcgtgctaatgaaaacagcaacatacaggttctttcagaacga
tctaatcctgaagtagacaattttaccaagccacctccatttttccctccaggagctcca
cctacccaccttccaccacctcccttcctcccaccccctccaactgtcagtactgctcca
cctctgattcccccaccaggtataccgataacagtaccaccaccaggctttccaccacca
cctggcggtcctccaccttccctcatacccacaatagaaagtggacattctggctatgat
ggtcgttctgttcgtgcattttcgtatggcaatgtcacctttccgcaccttgcaggttct
gctccttcgtggtctagtcttatggacaccagcaaacagtgggattactatgcacgacga
gagaaggatagggaacgggagagagaacgatcccgagatcgagatcgggatcgggaccgg
gaccgggacagagatcgagaacgcaccagagacagggaaagggaacgagaccacagtcca
actccaagtgtgttcaacagtgatgaagagcgatacagatacagagactatgcagaaaga
ggctatgaccgccacaggacaagtagagagaaagaagaccgacacagagacaggagacac
agagagaaagaagacactagacacaagtcatctcgaagtaacagcagacgtcgtcatgac
agtgaagaaggggacagccacagaaggcacaaacacaaaaaatccaaaagaagcaaagaa
ggaaaagaagccagcagtgaacctgctcccgagcaggagaacactgaagctgcccctgtg
gaatag
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