KEGG   Apaloderma vittatum (bar-tailed trogon): 104274253
Entry
104274253         CDS       T08559                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:avit00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:avit01009]
    104274253 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:avit03036]
    104274253 (KDM5B)
Enzymes [BR:avit01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     104274253 (KDM5B)
Protein phosphatases and associated proteins [BR:avit01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104274253 (KDM5B)
Chromosome and associated proteins [BR:avit03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104274253 (KDM5B)
SSDB
Motif
Pfam: PLU-1 KDM5_C-hel JmjC zf-C5HC2 PHD ASH2L-like_WH Exo70_N PHD_5 DUF3811
Other DBs
NCBI-GeneID: 104274253
NCBI-ProteinID: XP_009868129
UniProt: A0A091PCH4
LinkDB
Position
Unknown
AA seq 1033 aa
GEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQ
CAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLNRYCVFSHDEMI
CKMASKADVLDVVVASTVQKDMAIMIEDEKRLREKVDKLGVTDSERVAFELFPDDERQCL
KCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYKYKLGYRYTLEELYPMMNALKMRAE
SYNEWASNVNEALEAKINNKKSLISFKALIEESEMKKFPDNDLLRHLRLVTQDADKCASV
AQQLLNGKRQTRYRSGGGKCQNQLTVNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQ
QQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRTRLEQARWLEDVQLASSDQNSL
TLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQSLSSLVAA
VKEMEEIPAYLPNGAALKDAVQKAKDWLQEVEALQVGGRVPVLDTLAELVTRGRSIPVHL
DHLPRLENLVAEVQAWKECAANTFLCENSPYSLLEVLCPRCDIGMLNLKRKQKKLKEPVP
SGKKKSTKLETLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEAKALSSEED
AELKVCLCQKEPAAPMIQCELCRGFFHTGCVSVPNVVQGPRVWLCPQCHRSEKPPLEKIL
PLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLIQDKVGSGLLYNRWQA
TGGQLPETNKVSQTIGAMSFSMPHDWDNRTIYLHSPFPAGQHCVPLHVVSRELDELMMEA
QLLQVSLPEIQELYQILFTKQSPAAQAEQRSPGGAAAEKNDCCRGKKDGISYMERKLKRR
FERESFCDEKRARVKKMRTPKKKKLKLSHSKDLCTHKLERERERLFEMQRSSESHSLPSD
LSFSEQEDSEDEDAICPAVNCLQPEGDEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYI
CLSCSGKDSQYRK
NT seq 3103 nt   +upstreamnt  +downstreamnt
gggggagcccaaaacgtggtacggagccccggggtatgcggctgagcagctggaggatgt
catgaagaagcttgctccagagctgtttgaatctcagccagatctcttgcaccaacttgt
caccataatgaacccgaacactctgatggcccacggagtgcctgtgtatcgaactaacca
gtgtgccggcgagtttgtgatcaccttcccgagagcttaccacagcggcttcaatcaggg
attcaattttgctgaagctgtgaacttctgcacggtcgattggctcccgttgggtcgcca
gtgcgtggaacactaccgcctgctgaaccgctactgcgtcttctctcacgatgagatgat
ctgtaaaatggcttccaaagcagacgttcttgatgttgtggtcgcgtctacggttcagaa
agacatggccattatgatagaggatgagaagaggttgcgggagaaggtcgataaactggg
agtgactgactcggagcgggtggctttcgagctctttcctgacgacgagcgacagtgctt
gaagtgcaaaaccacctgtttcatgtcggccgtgtattgcccctgcaagcctggcttgct
ggtgtgcctgtaccacgtcgaggatctctgctcctgtcccacctacaaatacaaactggg
gtaccgctataccctggaggaactctatcccatgatgaacgcgctcaagatgcgtgcgga
atcctacaatgagtgggcttccaacgttaacgaagctctggaggcaaaaatcaacaataa
aaaaagtctcatcagttttaaggctttgatagaagaatcagaaatgaaaaaattcccaga
caatgacctgctgcgacacctcaggctggttacgcaggatgcagacaaatgtgcctcggt
tgcacagcagcttcttaatggcaaaagacaaaccaggtaccgctccggaggaggaaagtg
tcaaaaccagctgacggtgaacgagctgcggctgttcgtgaggcagctgtacgctctgcc
ctgcgtcctcagccagacgccgctgctgaaggatcttcttgatcgcgtggaagcttttca
acagcaaagccaaaaactcctttctgaagaaatgcccagcgctgcggaacttcaggaact
gctggacgtcagcttcgacttcgacgttgacctcccgcagctggctgaactgcggacgcg
cctggagcaggcgcgctggctcgaggacgtgcagctggcttcctcggaccaaaactctct
tactctagacgacatgagacgcctcatcgactcaggtgtcgggctcgctccctacccagc
ggttgagaaagcgatggcgaagctgcaggagctcctgacggtgtctgaacactgggatga
caaagcccgaaatctgataaaggccagaccacggcagtcgctgagcagccttgtggcagc
agtgaaggagatggaggagatcccagcctacctcccgaacggcgccgcgctgaaggacgc
ggtgcagaaggccaaagactggctgcaggaggtggaagctctgcaggttggaggacgggt
gcctgtcctggacacgctagcggaactcgtcacaagaggtcgatctattccggtgcatct
ggaccacctgccgaggctggagaacctggtggcagaagtgcaggcgtggaaggagtgcgc
cgctaacacctttctgtgcgagaactccccgtactctcttctggaggtgttgtgtccccg
ctgtgatattggaatgctgaacctgaagagaaagcagaagaagttgaaggagccagtgcc
cagtggaaagaagaaaagcactaagctagagacgctgagcgacttagagagagcgctctc
ggagagcaaagacactgcgtctgcgatggccacgcttggggaagcccgactgaaggagat
ggaagcgttgcgttctctgcgagcggccaacgaagcgaaggcgctgtcgagtgaagagga
tgcggaactgaaagtctgtctgtgccagaaggagccggcggctcccatgatacagtgtga
actctgcagagggttcttccataccggctgcgtttcggtgcccaacgttgtgcagggacc
tcgtgtgtggctctgtccgcagtgtcaccggtcagaaaagccacctttagaaaagatctt
accgctgctggcctccttgcagcgtatccgcgtgaggcttcccgagggggatgccctgcg
gtacatgatcgagagaactgtgaactggcagcacagagcacaacaaatgttatattcagg
gaatctaaaacttatacaagacaaagttggctcaggattattgtacaacagatggcaagc
cacgggcgggcagttgccggagacaaacaaggtttcccagacaattggtgcaatgtcatt
ctccatgcctcacgactgggataacagaaccatctatttacattctccatttcctgcagg
acagcactgcgtcccacttcatgtcgttagcagggagctggatgagctgatgatggaagc
ccagctgctacaggtttctctgcctgaaatacaggagctgtaccagatcctgttcacaaa
gcaaagcccggctgcgcaggcggagcagaggtcgcccggcggagcagcagctgagaagaa
cgactgttgccgaggaaaaaaggatggaatcagttacatggagagaaaactaaaacgtcg
tttcgagagagagagcttctgtgatgagaagagagcaagagtaaaaaaaatgagaacacc
caaaaagaagaaactgaaactgagtcactcaaaggatctctgcactcacaaactggagag
ggagcgggagcgtctctttgagatgcagcgttccagcgaaagtcactcgctcccctccga
cctgtcgttctctgagcaggaggactctgaggatgaagatgccatctgccccgctgtgaa
ctgcctccagcccgagggagatgaggtggactgggtccagtgcgacggcagctgcaacca
gtggttccaccaggtgtgcgtgggcatctctccagagatggcggagaaggaggactacat
ctgcctcagctgctccgggaaggactcgcaataccggaagtaa

DBGET integrated database retrieval system