Apaloderma vittatum (bar-tailed trogon): 104274986
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Entry
104274986 CDS
T08559
Symbol
FREM1
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104274986 (FREM1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104274986
NCBI-ProteinID:
XP_009869100
LinkDB
All DBs
Position
Unknown
AA seq
2119 aa
AA seq
DB search
MLYCTLSPSXVFDCHFLPNEVKYTHNGCPILDEDMVMLRLYRFTETETFVETFALHVQLL
EPDCNIIKMRSRALEVPEYYGVSTVIDKNVLTFDYDRKINLDCTISIASSETHLPAHGQL
ITGEVQQEQLRGNQPQSFFPGPSMIPGQQCRNGSCMLGLRVIHNTKMSCEEFLRMGIRYQ
HLDPPSPDTDYIPVRLDLTDSRSKTLHKTEYAWLPVQIKGAIPNQIPKAALMAKFILEVD
QFILTPITTTIVDAEDNETPKSLLVFNITKPPPQGFITHLSDHTKAVGSFTWKDLSDMLI
AYQPPNNSHTERRSYEVKFEVHDFYFEKSLPITVHLSIRTTDTNAPRVSWNTGLSLLEGQ
SRPITWQHFQIVDNDDIQNVRLVTVDGLQHGRLTVRGGKGFMFTVSDIQAGVVHYHHDDS
DSTKDFVVFRVFDGPHSIRHKFPINILPKDDSPPFLISNVVIEVHEGQTILIQGSMLHAS
DMDSSDDYILFNITKPPQAGEIMKKPGPNLIGYTISSFLQRDLFNGIIYYHHLGGEIFED
SLEFVLCDSHDPPNLSEPQVMMVHIIPVDDQLPREAPGVTRHLVVKETEIAHLTKKHLHF
IDVEEQDRELTYTITTSPFFSCTHGHSDAGKLFMVDTIPKLVKDPAALALQSFTQHAVNY
MKVAYMPPLQDIGPEPQQVQFIFSISNQHGGTLYGICFNITILPVDNQPPEVFTSHLRVE
EGGLSPVTEGHILISDVDTKREHLLLLLQRQPQHGAVELDGIPMKEGDRLSCEDLRNLAV
RYQHDGSETLTDNVLFTATDGIHFVEFILQIKVLPVNDEPPVMRSGLVPVLHCLEGEEVV
LSSKYIYATDADSDDMKLMFMLARQPYHGVVRKAGIAVDHFSQADVVSGFVTYKHTSGEI
GLTPSVEVLTFIVSDSEAGLDVKDCCYDGPLPPPVPLYNPFPVYDLNITVLPVDNQPPSI
ATGARFVVEEGSSAALTTNHLFATDPDTTADDLEFVLVSPPQFGYIENILPSPGFEKSNA
GISIASFQLKHLKALNINYVQARHVRMEPTADHFVLYVTDGLHRSAETPFFVLINPTNDE
VPEFIVRNITVQEGEMKELDLSVINAVDLDVPQDPLVFGVVQRPWYGFLINGVHGNNILH
YKKLIDHNHHSHGLLVHDFSMELLRNGMKLMYMHDNSENLTDSFKIQLSDGKHNVLRTIS
VKVIPVNDEKPVLSKNDDIEVNMGETRIISSAVLSAEDKDTPRDRIYYLFERLPENGQLQ
LKVGQGWMTLQIGMKCTQEELDMNLLRYVHTGAIGSKNQDSFTFYLWDGYNRSPAVDFHI
NIKDMEKGDISVFIKPLRLPKGDRGYITSDVLLALDGTDKPEELLYMITSPPQYGQIEYV
SYPGIPITSFSQMDVARQIISYVHSTKAVVPEDTFRFIISNGLRTKHGTFTIYLEAVDQA
LPTLSRNMGLRLVEGTLALLSPDVLQLSDPDTAKENLTFLLAQLPQYGHLYYRGAVLLQH
NFTQQDVDNRDVAYKHRGGDSQIDRFTFVATDRTNQGFIVNGRVQSEPVAFTIQVDHLDK
MAPKTIHLHCFSDVELLNNGNYGIYITARSLKASDPNTEDDKIIFKILRGPHYGYLENIT
TGGFIQEQFSQKDLNSKIILYVINPLQEVNSDNLEFQVTDASGNSAVPQRLELLWSRIEM
QQTEYEVCESVGVVSLKITRAGHSAESAFITVKVNDISAILGKDFTVTPSRLVQFDPGMS
TKTWNIAITYDGLEEDDEVFEVVLNSPVNAVLGTRTKAVVKILDSKGGQCSYSHSSGQSK
HDFWGRGMLFPVSSGSSSPSRPGNGLLEEIALPPSKSMREHGGDPRQEHSLANRSRTRLR
VTGNGRIVRPSSVFRNRTDVVFKYHGMVSLRIEDDTSSAKANKKSQVSVIKQAQPQINVV
SSRKTEIPQADKAEMASEPSSRHQDFYSFPKACTPDLKGLLHYEESIQKLFQCDGITWKF
WDSQNKEVSRKKCPSGWSHHEGSCYFLVANHKVTWNTAARACREQYLGSLASVANKQHMQ
WLWEFSGRKPFWIGLNDQVNPGHWEWNGGEPVTYVNWRRGSYHFLKRGRSCVLVQKRGKW
QATDCRKVKRNSYICSRKL
NT seq
6360 nt
NT seq
+upstream
nt +downstream
nt
atgttgtactgtactctttctccttcataggtttttgactgtcactttcttcctaatgaa
gtcaaatatacccacaatggctgtccaattttagatgaggacatggtcatgcttaggctc
tacaggtttacagaaactgaaacgtttgtagaaacattcgccctccatgtgcagttactt
gagccagactgtaacatcatcaaaatgcgctcacgtgctctggaagttcctgagtactat
ggtgtgtccacggtgattgacaagaacgtccttactttcgactatgacaggaagatcaat
ctggattgcaccatttccatagcctcttcagaaacccacctgcctgctcatggccagctt
atcactggggaagtgcagcaagagcagcttcgtggaaatcagccacagagcttcttccct
ggccctagtatgatcccgggccagcagtgcagaaatgggagctgcatgctggggctgagg
gtcattcacaacacaaaaatgagctgcgaagaatttctgaggatggggattcgataccag
caccttgaccctccctcgcctgacaccgattacattcctgtgaggctggatctcacagac
agcagaagcaaaaccctacacaagacagagtatgcatggcttcctgttcagattaaaggt
gctattcccaatcaaatacccaaagctgccctgatggcaaagttcatcctggaagtagat
caatttattttaacccccattacaaccacaattgtagatgctgaagacaatgaaactcca
aagtctctgcttgtattcaacattaccaagccacctccacagggcttcatcactcatttg
tccgaccatacgaaagctgttggctccttcacgtggaaagatctcagtgacatgctcatt
gcttatcagcccccaaataatagccacacagagaggaggagttatgaggtcaagtttgag
gttcatgacttctacttcgaaaagagtttaccaatcactgtgcatctttctatcaggaca
acagatacaaatgctcctcgggtttcatggaatactggcctcagccttctggaagggcaa
tcccgaccaatcacatggcaacacttccaaattgtagacaatgatgacatccaaaatgtt
cgcttggtcacagttgatggcttacagcacgggcgtctcacagtgagaggagggaaagga
tttatgttcacagtctctgacattcaggctggagttgttcactaccatcatgatgacagt
gattctactaaggactttgtggtatttagggtttttgatggcccccatagtattcgacat
aagtttccaatcaatatcctccctaaggatgacagccctccgtttcttatcagcaatgtg
gtcattgaagttcatgagggacagacgatcctgattcaaggttccatgcttcatgcttct
gacatggattccagcgatgattacatattgttcaatattaccaagccaccacaagctgga
gaaatcatgaagaaaccaggaccaaacttgatagggtatactatcagcagttttcttcag
agggatctatttaatggaataatttattatcatcatttgggaggagaaatatttgaagat
tcccttgagtttgtactgtgtgatagccatgaccctcccaatctctcagagccacaggtg
atgatggtgcatattatccctgtggatgatcagctgcccagagaagccccaggagtgacc
cgtcacctggttgttaaggagactgaaattgctcacctaactaagaaacatctccacttc
atagatgtagaagagcaagacagagaactcacatacaccataaccacttccccatttttc
tcttgcacgcatggccactcagatgctgggaagctgtttatggtggacacaatccccaag
ctggtcaaggatcctgctgctcttgcactgcagtcatttactcagcatgctgtgaactat
atgaaagttgcctacatgccaccgctgcaagacattgggcctgaacctcagcaagtccag
tttattttttccatcagcaatcagcatggtggcacgttgtatgggatctgcttcaatatt
acaattcttcctgtggacaatcaacccccagaggtttttacaagccatttgagagtggaa
gagggtggcctgagccctgtcacagagggacacattctcatctctgatgtggacacgaaa
agggagcatctcctcctcctcttgcagagacagcctcagcatggggcagtagagctggat
ggcatccccatgaaagaaggcgacaggctttcctgtgaggacctgcgtaacctagcagtc
aggtatcagcatgatggctctgagacactcactgataatgtactcttcacagccacagat
ggtatccactttgtagagttcatcctccagatcaaggtgttgcctgtgaatgatgaacca
cctgttatgcgatcaggccttgttcctgtgctccactgcctggagggtgaagaagtggtc
ctctcctcaaagtacatttatgccacagatgcagacagtgatgacatgaaactgatgttt
atgctggctcgccagccctaccacggggtagtgaggaaagctggcattgctgtggatcac
ttctcccaagctgatgtcgtctctggtttcgtcacgtataagcatactagtggggagatt
ggcctgacgccttccgttgaggtcttaaccttcattgtctctgacagtgaggctggccta
gatgtgaaagactgttgttatgatggacctcttcctcctccagttccgctttacaatcca
tttccagtatatgaccttaatatcactgtacttccagtggacaaccagcctccatcaatt
gcaactggtgcaaggtttgtggtggaggagggctcctcagcagcccttaccaccaaccat
ttgtttgccactgaccctgacaccactgcagatgacttagagtttgtcttggtttctcct
ccccagtttggttacattgaaaatatactgccttctcctgggtttgagaagagcaatgct
ggtatcagcatagcttcatttcagctgaagcacctgaaagccctgaacataaactatgta
caagccaggcatgtgcgaatggagccaacagcagatcactttgtactttatgtcactgat
gggctgcatcgttcagcagagactccattttttgtgctgatcaacccaaccaatgatgaa
gtccctgaattcatagtgaggaatattactgttcaagagggggagatgaaagagctggat
ctctctgttatcaatgcagttgatctggatgtacctcaagaccctttggtatttggagtt
gtgcagaggccctggtacgggttcctcattaatggagttcatggcaataatattctacac
tataaaaagttaattgaccacaaccaccacagccatgggttgcttgttcatgacttttcc
atggagctactgaggaatggaatgaagctgatgtacatgcatgataattcagaaaacctc
actgacagctttaaaatccagctatcagatgggaaacataatgtcctcagaaccatttca
gtaaaggtcattccagttaatgatgagaaaccagtgctgagcaagaatgatgatatagag
gtgaacatgggtgaaactcgaataatttctagtgctgttctgtcagcagaagataaagat
acccccagggacagaatctactacttatttgaaagacttccagaaaacggtcagcttcag
ctcaaggtaggccaaggctggatgactctccaaattggaatgaagtgcactcaggaagaa
ctggacatgaaccttttgagatatgtccatacaggagctatagggtccaagaaccaggac
agcttcacattttatctgtgggatggttacaacagatccccagctgtggacttccacata
aatatcaaggacatggaaaagggagacatttctgttttcataaaacctcttagactgcca
aaaggagatcggggctacattacatctgatgtcctccttgcactagatggcactgacaag
ccagaggagctcctctatatgataacctcgccaccccagtatggacaaatagagtatgtc
agctatcctggcatccccattacgagcttcagtcaaatggatgtagcacgacagatcatc
tcctatgtccacagcacaaaggcagttgttcctgaagacacattcagattcatcatcagc
aacggactgaggactaagcatgggacattcacgatctacttggaggcagtcgaccaagct
ttgcccacactatctaggaacatggggttaagattagtggaaggcactctggcactcctt
tctcctgatgtcctgcagctttcagatccagacactgccaaagaaaaccttaccttcctc
ttggctcagcttcctcaatatggtcatctctattatcgaggggctgtgctactgcagcac
aatttcacccagcaagatgtagacaacagggatgttgcatacaagcaccgaggtggggat
tcccagatcgacagatttacatttgttgcaacagataggactaatcaaggcttcatcgtg
aatgggagggtgcagagcgagccggtggcattcaccattcaggtggatcatttggacaaa
atggcaccaaaaactattcatctccattgcttttctgatgtggaactacttaacaatggc
aactacgggatctatattactgccaggtccctgaaggcatctgaccccaatacagaagat
gacaaaataatttttaagattttacgaggtcctcattatggctacttggaaaatataaca
acaggtggttttattcaggaacaatttagccaaaaggatttaaatagcaaaatcatactt
tatgtcatcaacccattacaggaggtgaattcggacaacttggagtttcaagtcacagat
gccagtggaaactctgcggtgccccagaggctggagctactgtggtctcggattgaaatg
caacagactgaatatgaagtgtgtgagagtgtgggagtggtgtctctgaaaatcaccagg
gcaggacactctgcagaatctgcctttatcactgtgaaggtcaatgacatatctgctatc
ctgggaaaggattttacagtgactccctccaggcttgttcagtttgacccaggaatgtca
accaagacgtggaatatagcaattacctatgatggattagaggaagatgatgaagtcttt
gaagtagttctgaactcccctgtgaatgctgttcttggcacccggacaaaagctgtagtg
aaaattttagactcaaaaggaggtcagtgcagctattcccattcttctggccaaagcaag
cacgacttctgggggagaggcatgctgtttccagtatcctcaggctcctcatcaccttcc
aggcctggcaatggtctcttggaagagatcgcattgcctccttccaaaagcatgagagag
catggaggggacccacggcaggaacacagcttggcaaatcggtcaaggaccaggctaaga
gtgactggaaatggcagaatagttcgtccttcatctgtatttagaaacagaactgatgtg
gttttcaaatatcacggaatggtatcactcagaatagaggatgacacctcatcagctaaa
gcaaacaagaagtctcaagtgtcagtaattaagcaagcacaaccacagataaatgttgtc
tcctctaggaagacagaaatcccacaagctgataaggcagaaatggcatctgaaccaagc
tcaagacatcaggacttctactcttttccaaaggcctgtacaccagatttaaaggggctc
ttgcattatgaagaaagcattcaaaagttatttcagtgtgatgggataacatggaaattc
tgggattcacaaaacaaggaggtaagcaggaagaaatgtccttctggatggagtcatcat
gagggcagctgctacttcctggtagcaaatcacaaggtcacctggaacactgctgctcgg
gcttgcagagaacaatacctggggagtctagcaagtgtggctaataagcaacacatgcag
tggctgtgggagttcagtgggaggaagcccttttggataggcttgaatgaccaagtcaat
cctggacactgggaatggaatggaggtgaacctgtaacctacgtaaactggagaagaggt
tcctaccactttctaaagagaggaagaagttgtgtactggtgcaaaagcgaggaaaatgg
caagcaactgactgcaggaaggtcaaacggaacagctatatatgttcaagaaagctgtaa
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integrated database retrieval system
