Archangium violaceum: JQX13_05980
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Entry
JQX13_05980 CDS
T07137
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
JQX13_05980
Enzymes [BR:
avm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
JQX13_05980
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
FG-GAP_3
FG-GAP
CbiZ
BBS2_Mid
Motif
Other DBs
NCBI-ProteinID:
QRK09677
LinkDB
All DBs
Position
1414790..1416307
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AA seq
505 aa
AA seq
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MLANPYLKIALSKPAGGTTPDGVAYTYEANDGSVADLDGDGEYELVLKWQPTNAKDNSQS
GYTGNTLIDAYKLNGTRLWRIDLGKNIRASAHYTSMVVYDLDGDGRAEVMLKTADGTVDG
KGTVIGSSSADHRNSSGYILSGPEYLTVFNGATGAAMATTNYLPARGTVSSWGDNYGNRV
DRILVGVAYLDGTRPSAVFSRGYYTRAVIVAWDWRDGKLTQRWIHDSSTPGSGAYGEGAH
WFSVADVNDDGKDDIIYGAATLNSDGRLLYRTGLGHGDALHVGVLNPNRGGKQVFMVHES
PGTYGSNRGMEMHDAATGTDLWGYGSGADVGRGMCADINPADPGEECWSTAGTVLMSAAG
VQISSTARPGSVNMAVWWDGDLSRELLDGVKIDKWVPSTLSLTRLLTASNHDAASNNGTK
SNPVISADILGDWREEVVLRNNASTALLLFTTPLETSYRIPTLMHDPQYRVQVAGQNMGY
NQPAHPSFFLGNGMSSVTLPALRTP
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
gtgctggccaacccctacctcaagatcgcgctctccaagcccgccggtggcaccacaccg
gacggtgtggcctacacctacgaagccaatgacggctcggtggccgatctcgacggcgac
ggcgaatacgagctcgtgctcaagtggcagccaaccaatgccaaggacaactcccagtca
ggctacaccggcaacaccctcatcgacgcctacaagctcaacggcacacgcctgtggcgt
atcgatctgggaaagaacatccgcgccagtgcgcactacacctcgatggtcgtgtatgac
ctcgacggggacggcagggccgaagtaatgctcaagaccgctgacggcaccgtggacggc
aagggcacggtgatcggctccagctcggccgaccatcgcaacagctccggctacatcctc
tccggcccggaatacctgaccgtcttcaacggtgccaccggtgccgccatggccaccacc
aactacctgcccgcgcgcggcaccgtgtccagctggggcgacaactacggcaaccgcgtg
gatcgcatcctcgtcggcgtggcctatctcgacggcacccggccctccgccgtgttctct
cgcggctactacacccgcgcggtgatcgtggcctgggactggcgtgacggcaagctgacc
cagcgctggatccacgacagctcgacccctggttcgggcgcctacggcgaaggcgcgcac
tggttcagcgttgccgatgtgaacgacgacggcaaggacgacatcatctacggcgccgcc
acgctcaacagcgacgggcgcctgctctaccgcaccggcctcggccacggcgatgcgttg
catgtcggcgtactcaacccgaaccgcggcggcaagcaagtcttcatggtgcacgagtct
ccgggcacgtacggcagcaaccgcggaatggaaatgcatgatgccgccaccggtaccgac
ctgtggggctacgggtcgggcgcggacgtcggccgcggcatgtgcgcggacatcaacccg
gccgatccgggagaagagtgctggagtaccgccggtacggtgctgatgagcgccgcgggc
gtgcagatctcctcgaccgcgcgcccgggcagcgtgaacatggccgtgtggtgggatggg
gacctctcacgcgaactgctcgatggcgtgaagatcgacaaatgggtgcccagcaccctg
agcctgacccgcctgctcaccgcttcgaaccatgatgccgcgtccaacaacggcaccaag
tccaacccggtgatctccgcggacatcctcggtgactggcgcgaagaggtcgtgctgcgc
aacaacgccagtaccgccttgctgctcttcaccaccccgctcgaaaccagctaccgcatt
ccgacgctgatgcacgatccgcagtatcgtgtgcaggtcgccggtcagaacatgggctac
aaccagcctgcccacccgagcttctttctcggcaacggtatgagcagcgtaaccctgcca
gcgctccgcacgccctga
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