Archangium violaceum: JQX13_24700
Help
Entry
JQX13_24700 CDS
T07137
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
avm
Archangium violaceum
Pathway
avm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JQX13_24700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avm03019
]
JQX13_24700
03400 DNA repair and recombination proteins [BR:
avm03400
]
JQX13_24700
Enzymes [BR:
avm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JQX13_24700
Messenger RNA biogenesis [BR:
avm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JQX13_24700
DNA repair and recombination proteins [BR:
avm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JQX13_24700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_30
TniB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QRK12949
LinkDB
All DBs
Position
complement(5760076..5761578)
Genome browser
AA seq
500 aa
AA seq
DB search
MAEARAHFGVEELRPGQREIIEALLQGRDVLGVMPTGAGKSLCFQLPALLLPKATVVVSP
LLALMRDQHEKLSEAEVDVVKLDSTLTQREADEVAREVRRGEHGLIYMTPEQLEKPERIE
ALRKAGVSLFVVDEAHCVSQWGHDFRPAFLALRDAVQQLGRPPILALTATATPQVREDVL
EQLGMRGARVMNTGIQRDNLFLEVARTVNPEAKRARLMKLLKEEPGTGIVYTATVRKAEE
VWQWLKDAGIEAGRYHGKMKASEREEVQQRFMENGYRVIVATKAFGLGIDKPDIRFVAHW
QFPDSLESYYQEAGRAGRDGQPARAVLFYRLEDRRIQGYFLGGKYPRREESQALYSVLRE
LWAHRQGKPVPLKVLTEASGLPANRVKVLVAQLAGAGILDRGSRGLKRLRDFESAEELGE
YLIAYEKRHQSDRERLQQMMRYGQTTGCRWRFLGEYFDEPEHAECGHCDNCEERAAGHFD
AASPTRIATPPTTADTANAV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcccgcgcccacttcggcgtggaggagctccggcccggccaacgggaaatc
atcgaggcgctgctgcagggcagggacgtgctcggggtgatgcccaccggcgcgggcaag
tcgctgtgcttccagctccccgccctcctcctgccgaaggccaccgtcgtcgtctccccg
ctgctggcgctgatgcgggatcagcacgagaagctctcggaggcggaggtggacgtggtg
aagctggactccacgctcacccaacgcgaggcggacgaggtggcgagagaggtccgccgc
ggcgagcacgggctcatctacatgacgcccgagcagctggagaagcccgagcgcatcgag
gcactgcgcaaggccggcgtctccctcttcgtcgtggacgaggcccactgcgtctcccag
tgggggcacgacttccgcccggccttcctcgcgctgcgtgacgccgtgcagcagctcggc
cggccccccatcctcgcgctgacggccaccgccaccccccaggtgcgcgaggacgtgctc
gagcagctcggcatgcggggggccagggtgatgaacaccggcatccagcgcgacaacctc
ttcctggaggtggcgcgcacggtgaaccccgaggccaagcgggcgcggctgatgaagctg
ctgaaggaggagccgggcacgggcatcgtctacaccgccaccgtccgcaaggccgaggag
gtgtggcagtggctgaaggacgccggcatcgaggcgggccgctaccacggcaagatgaag
gcctccgagcgcgaggaggtgcagcagcgcttcatggagaacggctaccgcgtcatcgtg
gccaccaaggccttcggcctgggcatcgacaagccggacatccgcttcgtggcgcactgg
cagttccccgactcgctggagagctactaccaggaggcggggcgcgcgggccgggacgga
cagccagcgcgcgccgtgctcttctaccggctggaggatcggcgcatccagggctacttc
ctcgggggcaagtacccccggcgcgaggagtcccaggcgctctactcggtgctgcgcgag
ctgtgggcccaccgccagggcaagcccgtgcccctgaaggtgctgacggaggcctcggga
ctgcccgccaaccgggtgaaggtgctggtggcacagctcgccggggccggcatcctcgat
cgcggctcgcgcgggctgaaacgactgcgtgacttcgagagcgccgaggagctcggcgag
tacctcatcgcctacgagaagcgccaccagagcgaccgggagcgcctccagcagatgatg
cgctacgggcagaccaccgggtgccgctggcgcttcctcggcgagtacttcgacgagccg
gaacacgccgaatgcgggcactgcgacaactgcgaggagcgggccgccgggcacttcgac
gcggccagtcccacacgcatcgccactccccccaccacggcggacaccgccaatgcggtg
tag
DBGET
integrated database retrieval system
