Agrobacterium vaccinii: HRR99_00040
Help
Entry
HRR99_00040 CDS
T08171
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
avq
Agrobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avq03016
]
HRR99_00040 (rph)
Enzymes [BR:
avq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
HRR99_00040 (rph)
Transfer RNA biogenesis [BR:
avq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HRR99_00040 (rph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
UHS60026
LinkDB
All DBs
Position
circular:complement(5549..6265)
Genome browser
AA seq
238 aa
AA seq
DB search
MRPSGRKLDQMRKVSFERNFSKHAEGSCLVKFGDTHVLVTASLEEKTPPWLRNSGKGWVT
AEYGMLPRSTHERMRREAASGKQGGRTQEIQRLIGRSLRAVVDLQALGERQISIDCDVIQ
ADGGTRTASITGAWIALHDCLKWMETRNMIKVEKVLKDHIAAISCGIFASQPVIDLDYLE
DSSAETDANFVITGSGGIVEIQGTAEGAPFSEEEFLTLLGLAKTGCAELVELQKQTIA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcggccttcaggcagaaaactcgatcagatgcgcaaagtttcttttgagcgcaacttc
tccaagcacgcagaaggctcctgtctggtcaaatttggcgatacgcatgttctcgtcacc
gccagccttgaagaaaagacgccaccatggctgcgcaacagcggcaagggctgggtgaca
gccgaatacggcatgctgccgcgttccacacacgagcgcatgcgtcgcgaagccgcgtcc
ggcaagcagggtggccgcacccaggaaatccagcggctgatcggtcggtcgctgcgcgcc
gtggtcgatcttcaggcgctgggcgaacgccagatcagcatcgactgtgatgtcattcag
gccgatggcggcacccgcacagcctccatcaccggcgcctggattgctcttcacgactgc
ctgaagtggatggaaacgcggaacatgatcaaggtcgagaaggtcctgaaagaccatatc
gccgccatttcctgcggtattttcgccagccagccggtgatcgatctcgattacctagaa
gattcttcggctgaaaccgacgccaacttcgtcatcaccggttccggtggcatcgttgaa
attcagggcacggctgaaggcgcgcctttctcggaagaggaattcctgacgctgctcggt
cttgccaagaccggctgcgcggaactcgttgagctgcaaaagcagacgattgcctga
DBGET
integrated database retrieval system