Agrobacterium vaccinii: HRR99_03540
Help
Entry
HRR99_03540 CDS
T08171
Name
(GenBank) cisplatin damage response ATP-dependent DNA ligase
Organism
avq
Agrobacterium vaccinii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
UHS60656
LinkDB
All DBs
Position
circular:712301..713929
Genome browser
AA seq
542 aa
AA seq
DB search
MKSFATLLDRLVLTPSRNGKLKLLTDYFRDTPDPDRGYGLAAIAGTLDLKSVKPAMLREL
VLERMDDVLFRYSYDYVGDLAETISLVWDTSQNANPPEVQDPGLGEIVDLMNSLGRTEVR
SAVRDLLDRLETSSRFAFLKLVTGGLRIGVSARLARQALADFGGRDITEIETLWHGLEPP
YEPLFAWLEGKTERPVIATPAIFHSVMLSTPVGDNDLQNLDPQDFVSEWKWDGIRVQLSR
SGETRKLYSRSGDDISGAFPDVLDRINFEGVVDGELLIGGTARSNIATRTFSDLQQRLNR
KTVTGKMLEEYPAFIRAYDLLFDGDEDIRGEVFLKRREKLTHLIENAPHDRFDISPLVPF
ESWDELETLRKAPPDPVIEGVMIKRKDSIYQAGRAKGPWFKWKRDPFNIDAVMMYAQRGH
GKRSSYYSDFTFGVWSDNEGAEQLVPVGKAYFGFTDAELEVLDKFVRDNTVERFGPVRAV
RATPQFGFVLEVAFEGINRSNRHKSGVAMRFPRIARLRADKLPSEADRLSTLMAMIDEKE
SG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccttcgcaaccctcctagaccgcctagtcctaacgccctcccgcaacggcaag
ctcaaactcctgaccgactacttccgcgacaccccagaccccgaccgaggctacggcctt
gccgccatcgctggcacgttggacctgaaaagcgtcaaacccgccatgctgcgcgagctg
gtgctggagcgcatggacgatgtgctgttccgctattcctacgactatgtcggcgatctg
gccgagacgatctcgctcgtctgggacaccagccagaatgccaacccgccagaggtccaa
gatcccggccttggcgaaatcgtcgatctaatgaactcgctgggccgaacggaagtgcgt
tccgctgtgcgcgatctcctcgaccggctggaaacctcctcgcgctttgccttcctcaag
ctcgtcaccggcggcctgcgcatcggcgtgtccgcccggctggcccgtcaggcgctggcg
gatttcggcgggcgggatatcaccgagatcgaaacgctctggcacggtctggaaccgccc
tatgagcccttgtttgcgtggctggagggcaagaccgagcggcccgtcatcgccacgccc
gccatctttcactccgtcatgctgtccacgccggtgggcgataacgacctccaaaacctt
gacccgcaggattttgtttcggagtggaagtgggatggcatccgtgtgcagctatcgcgc
tccggcgagaccagaaagctctattcccggtccggcgacgatatttccggcgcctttcca
gatgttctcgacaggatcaacttcgaaggcgttgtcgatggggaactgctgatcggcggc
acggcgcgctccaacattgcgacccgcaccttttccgatctccagcagcgcctgaaccgc
aagaccgtgaccggcaagatgctggaggagtatcccgccttcatccgcgcctatgatctt
ctgttcgacggcgatgaggacattcgtggcgaggtctttctcaagcgacgggaaaagctc
acccatctcatcgaaaacgccccgcatgacaggttcgatatctcgccgctggtgcccttc
gaaagctgggacgagttggaaaccctgcgcaaggcaccgcccgatccggtcatcgaaggc
gttatgatcaagcgcaaggacagcatctatcaggccggtcgcgccaaggggccgtggttc
aaatggaaacgcgatcccttcaacatcgatgccgtcatgatgtacgcccagcgcggccac
ggcaaacgctctagctattattccgacttcaccttcggcgtctggtcggacaatgaagga
gccgaacaactggtgcccgtcggcaaggcctatttcggctttaccgatgccgaactggaa
gtgctggacaagttcgtccgcgacaacaccgtcgagcgcttcggccccgtccgcgccgtt
cgcgcgaccccgcaattcggtttcgttctcgaagtcgccttcgaaggtataaatcgctcc
aaccgccacaaatccggcgtagccatgcgctttcccagaatagccagactccgcgccgac
aagctgccatcggaggccgacagactatcgacgctgatggcgatgatcgacgagaaggaa
agcggttag
DBGET
integrated database retrieval system
