Agrobacterium vaccinii: HRR99_20760
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Entry
HRR99_20760 CDS
T08171
Name
(GenBank) putative Ig domain-containing protein
Organism
avq
Agrobacterium vaccinii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Big_9
Cadherin_5
Cadherin-like
TIG
SprB
Motif
Other DBs
NCBI-ProteinID:
UHS63948
LinkDB
All DBs
Position
linear:1223147..1227853
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AA seq
1568 aa
AA seq
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MYDYGIVLNASNASGNDTVSSSFVLPSDSGAEVSLTGPVNTGATLILTCATASSDATLSA
LALDNGSLDPGFSSATTSYTVSVANSVSSIAITPTANDGNSTITVKGVAVTSGAASSSIP
LNVGTNAIPVVVTPEYGSSKTYTVTVTREAGPVMSSISPDSGSTNGATSVSITGTNLATI
NSVKFGTEAATNFTVNSATSISATTPAHVSGAVDVVLSDGMNTATLSSGFTYNAATFTFS
PPAGALTAGTVGTAYNATIAASGGTASYTYEVTSGELPVGLDLNSSTGVISGTPTAAESA
TFTITAKDANAATSPAVYTLVIGVQAPVANAVSETVAANSSANAITLNITGGAAALVAVD
TQASHGTATASGTTITYTPTAGYSGTDSFTYTATNATGTSSPATVSITVSAPTSFTFSPP
AGALTGGTVGTAYNVTIAASGGTASYTYEVTSGELPAGLDLNSSTGVISGTPTTAENASF
TITAKDANTAQDLAAYTLVIGVQAPVANAVSKTVAANSSANAITLNITGGAAASVAVDTQ
ASHGTATASGTAITYTPTAGYSGTDSFTYTATNATGTSSPATVSITVSAPTSFTFSPPRG
ALTAGTVGTAYNVTIAASGGTASYTYEVTLGELPAGLDLNSSTGVISGTPIAAENASFTI
TAKDANTAQDSAAYTLVIGVQAPVANAVSETVAANSSANAITLNITGGAAASVTVDTQAS
HGTATASGTAITYTPTAGYSGTDSFAYTATNATGTSSPATVSITVSPPTSFTFSPPRGAL
TAGTVGTAYNVTIAASGGTASYTYEVTLGELPAGLDLNSSTGVISGTPTAAENASFTITA
KDANAATSPAVYTLVIGVQAPMANAVSETVAANSSANTITLDITGGAAALVAVDTQASHG
TATASGTTITYTPTAGYSGTDSFTYTATNATGTSSPATVSITVSAPTSFTFSPPRGALTA
GTVGTAYNETIAASGGTASYTYEVTSGELPAGLDLNSSTGVISGTPTVAESATFTITAKD
ANTAQDSAAYTLSVVIATAEDLVLSPSEGNLTDAMAGETYNQQITVSGGTAPFAFNVISG
TLPDGLTLSTSGLLSGTLADNTQNDYVFEVQVRDAQNMIGKARYNLTVKEQSVQVVSQTI
TVEAGSSPPDTRLDKNATGGPFDSGELVSVVPSNAGRAVLTMGDYAQSGPVSPVGWYLKF
TPTPGFSGPVVITFSLTSGLGSSTGTVTYNLGYNPAEVATEIDGLVRDFVRSRQSMISSA
INVPGLLERRNAENANEPVTTRISPSSNGMTIGFSTSFAQIEAYRNGAGDASGQSLGGIS
SSPFNVWLSGAFLMHNRDDDDDRRWGSFGMLSAGADYLITDKALVGLSFHLDRMTDPTDA
DAKLTGNGWLVGPYSSLEIGKGVYWDTSILYGGSANDIDTAFWDGTFDTKRWMADTAIKG
QWRLDEVTVLTPKLRAVYLSEQVDDYTVSNAAGDELTLDGFTSEQLRVSLGAEVARKFTL
SNDTTLTPKIGLTGGFAGLDGSGAFGTVSTGISLATPDDWNLDFSLLFNVEGDGDRYGGA
RARMSKRF
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
gtgtatgattacggcatcgttctaaatgctagtaatgcatctggaaatgatactgtctct
tcaagcttcgtattaccatctgattcgggggccgaagtcagtctgactggaccggtcaat
actggcgctaccctcatactgacgtgtgcaacggcttcatccgacgcaacactgtcagca
cttgcgctcgacaacggcagcttagatcctggcttttcgtctgcgacaaccagctacacg
gtctcagtcgccaattcagtaagctctatcgccatcaccccaacggccaatgatgggaac
tcaaccataacagtaaagggcgtagcggtcacatccggtgccgcatcatcctccatcccc
ctcaacgtgggtaccaacgcaatccctgttgtggtgacgccggaatatggcagttcaaaa
acctacacagtcacggttacgcgcgaagcgggccccgttatgtcatccatatctcccgac
agcggttccaccaatggtgcaacatccgtctcgatcactggcaccaatctcgccaccatc
aatagcgtcaaattcggaacggaagctgccacaaatttcaccgtcaacagcgcaacatcc
atcagcgcaaccacgccagctcatgtgtctggtgctgtcgatgtcgttctgtcggatgga
atgaacacggcgacgctctcaagcggattcacgtataatgccgcaactttcaccttctcg
ccacccgcaggagccctgacagcaggtactgtgggaacagcctataacgcgaccatcgcg
gcctcgggcggtacggcgtcctacacatacgaggtcacatcaggtgaacttcccgtaggc
ctcgacctcaactcctcgaccggcgtcatttccggcaccccgacagcagctgaaagcgcg
accttcaccattaccgcaaaggatgcaaacgccgcgacaagcccggcggtctacacgctg
gtgattggggttcaagctcctgtggctaacgccgtttcagagacggtggctgccaactcg
tcggccaatgccatcaccctcaacataacaggtggcgcagccgctttggtcgccgtcgat
acgcaagccagccacggcacggcaacggcatccggcactaccatcacctacacgccgacg
gcaggctattccggcactgacagcttcacctacacggcgacgaatgcgacgggcacgtcg
tcaccggcgaccgtctccatcaccgtgtccgccccgacctcgttcaccttctcgccaccg
gcaggagctctgaccggaggcacggtaggcacagcctataacgtgaccatcgcggcatcg
ggcggtacagcgtcttacacatacgaggtcacatcaggtgaacttcccgcaggcctcgac
ctcaactcctcaactggcgtcatttccggcaccccgaccacagctgaaaacgcgagcttc
accatcaccgcaaaggatgcaaacactgcacaagacttggcggcctatacgctggtgatt
ggggttcaagctcctgtggcgaacgccgtctcgaaaacagtggctgccaactcgtcggcc
aatgccatcactctcaacataacaggtggcgcagccgcttcggtcgccgttgatacgcaa
gccagccatggcacggcaacggcatccggcaccgccatcacctacacgccgacggcaggc
tattccggcactgacagctttacctacacggcgacgaatgcgacgggcacgtcgtcaccg
gcgaccgtctccatcaccgtgtcggccccgacctcgttcaccttctctccaccccggggc
gccctgacagcaggcactgtgggcacagcctataacgtgaccatcgcggcatctggcggt
acagcgtcctacacatacgaggtcacattaggtgagctaccagcaggcctcgacctcaac
tcctcgaccggcgtcatttccggcaccccgatagcggctgaaaacgcgagcttcaccatc
accgcaaaggatgcaaacactgcacaagactcggcggcctatacgctggtgattggggtt
caagctcctgtggctaacgccgtttcagagacggtggctgccaactcatcggccaacgcc
atcaccctcaacataacaggtggcgcagccgcatcggttaccgtcgatacgcaagccagc
cacggcacggcaacggcatccggcaccgccatcacctacacgccgacggcaggctattcc
ggcactgacagctttgcctacacggcgacgaatgcgacgggcacgtcgtcaccggcgacc
gtctcgatcacagtatctcctccgacctcctttaccttctctccaccccggggcgccctg
acagcaggcactgtgggcacggcctataacgtgaccatcgcggcctcgggcggtacggcg
tcctacacatacgaggtcacattaggtgagctaccagcaggcctcgatctcaactcctcg
accggcgtcatttccggcaccccgacagcagctgaaaacgcgagcttcaccatcaccgca
aaggatgcaaacgccgcgacaagcccggcggtctacacgctggtgattggggttcaagct
cctatggcaaacgccgtttcagagacggtggcggccaactcgtccgccaataccatcacc
ctcgacataacaggtggtgctgccgctttggtcgccgttgatacgcaagccagccacggc
acggcaacggcatccggcactaccatcacctacacgccgacggcaggctattccggtact
gacagcttcacctacacagcgacgaatgcgacgggcacgtcgtcaccggcgaccgtctcc
atcaccgtgtcggccccgacctcgttcaccttctctccaccccggggcgccctgacagca
ggcactgtgggcacggcctataacgagacaatcgcggcatctggcggtacagcgtcctac
acatacgaggtcacatcaggtgaacttcccgcaggcctcgacctcaactcctcaaccggc
gtcatatccggcaccccgacagtggctgaaagcgcgaccttcaccattaccgcaaaggat
gcaaacactgcacaagactctgcggcctatacgctgagcgtcgtcatcgctacggcagaa
gatctcgttctgtctccctctgaaggtaatctgacggatgcgatggctggagaaacatac
aatcaacagatcacggtctcaggcggaaccgcccctttcgccttcaatgtcatttcgggc
accttgccggatgggctcacattgagcacatccggcttattgtccggtacattggctgac
aacacgcagaacgactatgttttcgaggtccaggtcagggacgcgcaaaacatgatcgga
aaagctcgatacaatctgacggtaaaggagcaatccgttcaggttgtaagccagacgatc
actgtcgaggcgggttcctctcccccagatacgcgtctcgacaagaatgcgaccggcggt
cccttcgatagtggagagcttgtttccgtcgtgccgtcgaatgcgggcagggctgttctc
accatgggtgactatgcacaatccggtccggtttctccggttggctggtatctgaagttt
actccgacgccgggcttttccgggcctgtcgtgatcaccttcagcctcacgagcggcctt
ggcagcagcacgggaaccgtgacctataaccttggttacaatccagccgaggtcgcaacc
gagatcgatggcctcgtcagggattttgtgagatcgcgacaaagcatgatctcatcagcc
atcaacgtgccgggtcttctggaaagacggaacgcagagaacgcgaacgagccggtgacg
acgaggatatctccctcttccaatggtatgacaatcggcttttcaaccagctttgcccaa
attgaggcctatcgaaacggtgctggcgatgcttccgggcaatccctcggcggaatatcg
tcgtcgccattcaatgtctggctgagcggtgcatttctgatgcacaatcgcgatgatgac
gacgatcgcaggtggggtagttttggcatgctctcggcgggcgctgattacctgatcacc
gacaaggcactcgtcggtctatcgttccacctggatagaatgaccgatccgaccgatgcg
gatgcaaaacttacgggcaatggctggctggtagggccctatagctcactggagattggc
aagggcgtgtattgggataccagtattctctacggcggttcggccaacgacatcgacacc
gccttctgggacgggaccttcgacaccaagcgctggatggctgatacggcgatcaagggg
caatggcgtttggatgaggtaactgtgctgacgcccaagttacgcgctgtctatctctcc
gaacaagtcgacgattacactgtgtccaatgccgcaggcgatgagttgaccctcgatggc
ttcacttccgagcaactgcgagtgagccttggcgccgaagtggcgcgaaagttcacgctg
agcaatgataccacgctgaccccgaagattggcctcacaggcgggttcgctggccttgac
gggtccggtgcttttggcacggtgtcgacgggaatatcattggcaactcccgacgattgg
aacctcgattttagcctgcttttcaatgtggaaggcgatggcgacagatatggaggggca
cgcgcaaggatgagtaagcgattctga
DBGET
integrated database retrieval system
