Agrobacterium vaccinii: HRR99_20900
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Entry
HRR99_20900 CDS
T08171
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
avq
Agrobacterium vaccinii
Pathway
avq01501
beta-Lactam resistance
avq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HRR99_20900
01503 Cationic antimicrobial peptide (CAMP) resistance
HRR99_20900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avq02000
]
HRR99_20900
01504 Antimicrobial resistance genes [BR:
avq01504
]
HRR99_20900
Transporters [BR:
avq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HRR99_20900
Antimicrobial resistance genes [BR:
avq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HRR99_20900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UHS63974
LinkDB
All DBs
Position
linear:complement(1257819..1260956)
Genome browser
AA seq
1045 aa
AA seq
DB search
MAQLFIRRPILAWVFALFISIAGVIALPFLPIAQYPKVAPPQLTISTTYPGASPQDIYQG
VTRLIEDELNGVEGLMYFESTSDTSGQVSINATFEAGTNINQASVDVQNAIRRVEARLPS
AVAAQGVTVEEAASGFLMFITLTSTDGTMDEVALGDYLNRNVLGELRRIDGVGRAQLFSS
QRAMRVWIDADKLVGLNLTAGDINSAITAQNAQVAAGQIGAAPNPVSQDLTATVLVKGQL
TDPAEFGNIVLRANPDGSSVRLKDVARIELGAETYNFSSRLNGQASAAVGIQLSSTGNAV
ATSKAVSAKLEELSRFFPTGVAYAVPYDTSPFVSASIEKVLHTLIEAIVLVFVVMFVFLQ
NFRYTVIPTLVVPVALLGTCAVMYATGFSINVLTMFAMVLAIGILVDDAIVVVENVERIM
AEEGLSPKAATQKAMKQITGAILGITLVLACVFIPMAFFPGSTGIIYRQFSLTMVVSILF
SAFLALSLTPALCATFLKPIKQGHHEKRGLGGWFNRKFDGMTNGYTKAATGGARRAGRMM
VIYLALVAGLGYLFVSLPSAFVPDEDQGFLIVDIQGPPEASANRTVASIEQIEKIFAEEP
SVKDVVAIQGFSFSGNGANAALAFITLKDWSERGADNSAQDIANRANMKLFGLKDAQTFA
LSPPPIEGFGTSGGFSFRLQDRNGIGQAALSAAAGELMQKASKSPVLAGMRIEGLPDAAQ
IMLVIDREKANTFGITFADINNTITANLGSSYINDFPNAGRMQRVVVQAQDRDRLQVEDL
LKLNVRNASGGMVPLSSFAIAQWQKGSPQVVGYNGYPTIRISGAPSPGNSTGAAITEMER
LASELPGGIGYEWTGQALEEIKSGSQAPFLFGMSILFVFLLLAGLYESWSIPLAVMLVVP
LGIFGSVLAVLLRDMPNDIYFKVGLIAIIGLSAKNAILIVEFAKDYYAEGKSLLESAVLA
AKVRFRPIIMTSLAFTLGVVPLAIATGPSAASQNAIGTGVLGGMISATILAVFFVPAFFV
FVLTLMRTKRPEVETPPEEPAPVQY
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctctttatcagacggccgatcctcgcctgggttttcgcgctgttcatatcc
attgcgggcgtcatcgccctgccgtttctgccgattgcgcagtatcccaaggtcgcgcct
ccgcagctgacgatttcgaccacctatcccggcgcttcaccgcaggacatctatcaaggt
gtcacccggctcatcgaagacgagttgaacggcgttgaggggctgatgtatttcgagtcc
acctccgatacgtcgggtcaggtctcgatcaacgccaccttcgaagcaggcaccaacatc
aatcaggcctccgtggatgtgcagaacgccatccgccgcgtcgaagcgcgccttccctct
gccgttgctgcccagggcgtgacggtggaagaggctgcctccggcttcctgatgtttatt
acgttgacctccaccgatggcaccatggatgaggtggcgttgggcgattacctcaaccgc
aacgtcctgggtgagctgcggcgtatcgatggtgtcggtcgcgcccagctcttctcgtcc
cagcgcgccatgcgcgtctggatcgatgcagacaagctggtgggcctcaaccttacggca
ggcgatatcaacagcgcgattaccgcccagaacgcgcaggtcgcggctggccagatcggt
gctgcccccaatcccgtcagtcaggatttgacggccaccgtgctggtcaagggacaactg
accgaccctgcggaattcggtaacatcgtgctgcgcgccaacccggatggcagcagcgtg
cgcctgaaagacgttgcccgcatcgaactcggtgccgaaacctacaacttctccagccgc
ctgaacggtcaggccagtgctgccgtcggcattcagctgtcctccaccggtaatgccgtc
gcaacgtcgaaagccgtctcggcaaagctcgaggaactgtcgcgcttcttccccaccggc
gtcgcctatgccgtgccttacgacaccagccccttcgtctccgcctccatcgagaaggtg
ctgcacacgctgatcgaagccatcgttctggtcttcgtcgtcatgttcgtgttcctgcaa
aacttccgctacacggtcattcccacgctcgtcgtgcccgtggcgctgctcgggacctgc
gcggtcatgtatgccaccgggttttccatcaacgtgctgacaatgttcgccatggtgctc
gccatcggcattctggtggatgacgccatcgtcgtggtggaaaacgtcgagcgcatcatg
gccgaggaaggcctgtcgccgaaagcggcgacgcaaaaagcgatgaagcagatcaccggt
gccattctcggcatcacgctggttctggcctgcgtcttcattcccatggcgtttttcccg
ggatcgaccggcatcatctaccgtcagttcagtctgacgatggtcgtgtccattctgttc
tcggcgttcctggctctgtcgctcacgcctgccctgtgtgccaccttcctgaagcccatc
aagcagggccatcatgaaaagcgcgggctcggcggctggttcaaccgcaaattcgatggc
atgaccaacggctataccaaggccgcgaccgggggtgcccgtcgtgccggacgcatgatg
gtcatctatctcgcgctcgtcgccggtctcggttacctcttcgtcagccttcccagcgcc
ttcgtgccggatgaggatcagggcttcctgatcgtcgatattcagggcccgccggaagcc
agtgcaaaccgcacagtggcctctatcgagcagatcgagaaaatcttcgcggaagaacct
tcggtcaaggatgtcgtcgccattcagggcttcagcttctccggcaacggggcgaacgcg
gcgctcgccttcatcaccctgaaggattggagcgaacgtggagccgacaactcggcgcag
gatatagccaaccgtgccaacatgaagctgttcgggctgaaggacgcgcagactttcgcg
ctgtctccaccgcccatcgaaggcttcggcacatccggcggcttctcgttccgtcttcag
gaccgcaacggcatcggccaggcagccctttcggctgcggctggcgagttgatgcaaaag
gcgagcaaaagccccgttctggctggcatgcgcatcgaaggcctgcctgatgctgcgcag
atcatgctggtgatcgaccgtgaaaaagccaatacattcggcatcaccttcgcggatatc
aacaacacgatcaccgccaatctcggatcgtcctatatcaacgacttcccgaatgcgggc
cgcatgcagcgcgtcgtcgtgcaggcgcaggatcgtgaccgccttcaggtcgaagacctg
ctgaaactcaacgtgcgcaatgccagtggcggcatggtgcccttgagctcctttgccatt
gcgcagtggcagaagggctcgccgcaagtcgtcggttacaacggctatccgaccatccgt
atctccggtgccccatcgcccggcaattctacaggtgctgccatcacagaaatggaacgt
ctggcgtccgaacttcccggcggcatcggctacgagtggaccgggcaggcactggaagaa
atcaagtccggctcgcaggcaccgttcctgttcggaatgagcattctcttcgtgttcctg
ctgctagccggtctttacgaaagctggtccatcccgctggcggtcatgctggtcgtgccg
ctcggcatcttcggctcggtacttgcagttctgctgcgggatatgcccaatgacatctac
ttcaaggtggggttgatcgcgatcatcggactatcggccaagaacgcgattctcatcgtg
gaatttgccaaggactactacgcggaggggaaatccctgctggaatccgccgttcttgcc
gcaaaggtccgctttcgcccgatcatcatgacgtcgctggcattcacgctcggcgtggtc
ccacttgccatcgccaccggccccagcgccgccagccagaacgccatcggcaccggcgtg
ctgggcggcatgatctcggccaccatcctggccgtcttcttcgtccccgccttcttcgtc
ttcgtcctcaccttgatgcgaacgaaacgaccggaggtggagacgccacctgaagagccg
gcaccggtccagtattga
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