Aeromonas veronii B565: B565_1554
Help
Entry
B565_1554 CDS
T01462
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
avr
Aeromonas veronii B565
Pathway
avr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B565_1554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avr03019
]
B565_1554
03009 Ribosome biogenesis [BR:
avr03009
]
B565_1554
Enzymes [BR:
avr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B565_1554
Messenger RNA biogenesis [BR:
avr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B565_1554
Ribosome biogenesis [BR:
avr03009
]
Prokaryotic type
rRNA helicases
B565_1554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
AEB49589
LinkDB
All DBs
Position
1736572..1738473
Genome browser
AA seq
633 aa
AA seq
DB search
MSDTEQLPLFSELGLAAPVLKALQDVGYERPSPIQAAAIPHLMAGHDLLGQAQTGTGKTA
AFALPLLSRLEAGNRNTQILVLAPTRELALQVAEACQRYAHHMPDFHVLPIYGGASYETQ
TRALRRGAQVVVGTPGRVMDLIRRKNLDLSGLKALVLDEADEMLRMGFIDDVDWIMEQCP
STRQVALFSATMPEQIRRVAQKHLKQPKEIKIASKTATATTIRQRYWQVTGLHKLDAMTR
LLEVESYEALLVFVRTKNAAEELAGKLAARGHACEALHGDIPQKLRERTVDKLRQGQLDI
LIATDVVARGLDVERITHVVNYDIPYDTESYVHRIGRTGRAGRKGEAILFVAPRERRMLR
AIEHATRQAIEPMKMPSTEDINQHRLAKFKERIRETMMGEELEIYHNLVNELIEEDSADP
LELAAALAKLVQGDQPLLLDDSIPDPLLNAGNDRGGFERRDFNDRGGRDFGDRGDRPARR
MPSLEPRPLKDNPDVEMERYRVDVGAHHGVKPGQIVGAIANEANIESRFIGNIDIADDFS
TVDLPKGMTADVLEVIKKARVCQRPLQITRYTEVPAGGNTSSRPPRGDRPFRGDRPFNKD
RRPQGDRPFNKSGERREGGFNKDRKFGGKRRES
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataccgaacaactgcccctttttagtgagcttggactggccgcgcctgtattg
aaagcgctgcaggacgtgggctatgagcgcccgtcaccgatccaggccgcagcaattccc
cacctgatggcgggacacgatctgctggggcaggcgcaaaccggtacagggaagaccgct
gcttttgccttgcctctgttgtctcgtctggaagctggtaaccgcaacacccagatcctg
gtgctggcgcctacccgcgaactggcgctgcaggtggctgaagcgtgccaacgctatgcc
caccacatgcctgatttccacgtgctgcccatctacggcggtgcctcctacgaaacccag
acccgcgctctgcgtcgcggtgcccaggttgtcgtcggtactccgggccgcgtgatggac
ttgatccgtcgcaagaacctggacctctccggcctgaaagccctggtactggacgaagct
gatgaaatgctgcgtatgggcttcatcgacgacgttgactggatcatggagcagtgcccg
agcactcgtcaggttgccctgttctctgccaccatgccggagcagatccgtcgcgtggcc
cagaagcacctgaagcagcccaaagagatcaagatcgcctccaagactgctaccgctacc
actattcgccagcgctactggcaggtaaccggtctgcacaagctggacgccatgacccgt
ctgctggaagtggaatcctacgaagccctgctggtgttcgtgcgtaccaagaacgctgcc
gaagagctggctggcaagctggccgcccgtggtcacgcctgtgaagcgctgcacggcgac
atcccgcagaaactgcgtgagcgtaccgttgacaagctgcgtcagggccagctggacatc
ctgatcgccaccgacgttgtcgcccgtggtctggacgttgagcgcatcacccacgtagtg
aactacgacattccgtacgacaccgaatcttacgttcaccgtatcggccgtaccggtcgt
gccggtcgtaaaggcgaagccatcctgttcgtcgctccccgcgagcgtcgtatgctgcgc
gccatcgagcacgcaacccgtcaggccatcgagccgatgaagatgccgagcaccgaggac
atcaaccagcatcgtctggccaagttcaaagagcgcatccgcgaaaccatgatgggtgaa
gagctcgagatctaccacaacctggtaaacgagctgatcgaagaggattctgccgatccg
ctggagctggctgccgcattggccaagctggtacagggtgaccaaccgctgctgctggat
gattccattccggatccgctgctgaacgctggcaatgatcgtggtggcttcgagcgccgt
gacttcaacgaccgtggcggtcgtgatttcggtgaccgtggtgatcgtcctgcccgtcgc
atgccgtccctggagccccgtccgctgaaagacaacccggatgtggagatggagcgctat
cgtgtagacgtgggtgctcatcacggcgtcaagccgggccagatcgtgggcgccatcgcc
aacgaagcgaacatcgagagccgcttcatcggcaacatcgacatagccgatgacttctcc
accgtcgatctgccgaaaggcatgaccgccgatgtactggaagtgatcaagaaagcccgt
gtttgccagcgtccgctgcaaatcacccgctacaccgaagtgcctgccggtggcaacacc
agcagccgcccgccccgtggtgatcgtccgttccgtggtgaccgtcctttcaacaaggat
cgccgtccccagggtgaccgtccgttcaacaagagcggggagcgccgtgaaggtggcttc
aacaaagatcgcaaattcggtggcaagcgtcgcgaaagctga
DBGET
integrated database retrieval system
