Aerococcus viridans: AWM76_04255
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Entry
AWM76_04255 CDS
T04270
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
avs
Aerococcus viridans
Pathway
avs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AWM76_04255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avs03400
]
AWM76_04255
Enzymes [BR:
avs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AWM76_04255
DNA repair and recombination proteins [BR:
avs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AWM76_04255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
T2SSE
UvrD_C
nSTAND3
RsgA_GTPase
AAA_12
HHH_5
AAA_28
SLFN-g3_helicase
DEAD
AAA_17
UvrD-helicase
PIF1
AAA_29
AAA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AMC00809
LinkDB
All DBs
Position
863475..866048
Genome browser
AA seq
857 aa
AA seq
DB search
MRQNQNQPTSEDYVIGEVKATFFFNESNFYRVMSVEIDETNTMYSEKEIVMTGNFPTIQD
GTTYHFNGKLVDHAKYGVQFQVTSYEAQKITSKEGLIRFLSSEQFPGIGDTIASRIVDAF
GDQTIDTILNDVESLKVVKGLSKKTRTMLHERMVEQRGNEQVFVKLAEMGFSSRLAGQIY
GLYHNEAVEIIEENPYILIDDIRGFGFQKADQIALNIGFPLDSPVRIAGGVMFVLNLATF
ESGNTFVMEAPLIEKTQEVLMHGQSQFIDAKLIEDAISDMNETGKLILSEEGRVALPTLY
FAEVGIAKMMGQMQQPQYQPQYPGVDLDEEIQKLEQDLGISYGQAQKKAIKEALTSKMFI
LTGGPGTGKTTVLNGIVQLYARLNDISLNVEEYDPGAFPISLAAPTGRAAKRMTEMIRLP
ASTIHRLLGLTGEEDDSEDGEVAGMQLETDLLIIDEMSMVDTWLAYKLLSSVPSFMQVIF
VGDKDQLASVGPGQVLADLLSSQTVKTRELDEIYRQKNQSTIVQLAHQIKQGIVPKDLMI
NQRDRSFFKVQANQIADLVAIVAKRAVDKGYQKRDVQVLAPLYKGQAGINHINERLQAVL
NPNDDGKRRELVYFEQTFRVGDKVLQLKNQAEKNVFNGDLGEIVAIFFAKETTNKVDQIV
VQFDEVEVTYERNDFNEITLAYCTSIHKSQGSEFPIVIVPLVPQHHRMLKRNLLYTGITR
AKQSLIMCGEPQAFQTAIQNVDASRQTQLKDFLMEAVDIDERMATAVAAEIEDKEENDVD
SKESKSENSTVTSSQIESNKDGEENQAENESTTIGSDTEASDEAGSAVADFKLTAELVLT
NAIDPMIGMDGLKPEDF
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaaaatcagaaccaaccaacaagtgaagattatgtcataggtgaggtaaaggcg
accttcttttttaatgaaagcaacttttatcgggtaatgtcagttgaaatagacgaaacc
aataccatgtattcagaaaaagaaatcgtgatgacgggaaacttcccaactattcaggat
gggacgacctatcattttaacgggaaactggtggaccacgctaaatatggtgtccaattc
caagtaacttcttatgaagcgcagaaaatcacttctaaagaagggttaattcgctttctg
tcgtccgaacaatttccaggaattggggatacgattgccagtcgtattgtcgatgctttt
ggcgaccaaaccattgatactattttaaatgatgtagaatccttaaaagtggttaaaggt
ttgtctaaaaagacaagaactatgctacatgagcggatggttgaacaaagggggaatgaa
caagttttcgttaagctagctgagatgggcttttcatcgcggttggctgggcaaatttat
ggcctctaccataacgaagcagtcgaaattattgaagaaaatccttatattttgatcgac
gatatccgcggttttggttttcaaaaagcagaccaaatcgctttaaatatcggtttcccc
ttggattcaccagttcggattgctgggggtgtcatgtttgtcctaaacttagcaaccttt
gaatcgggtaacacctttgtcatggaagcgccactgattgagaaaacccaagaagtattg
atgcatggacagtctcaatttattgatgctaaattaatcgaagatgctatttctgacatg
aatgagacaggtaagttgattttatctgaagaagggcgtgttgccctgcctactttatat
tttgctgaagtaggtattgccaaaatgatggggcaaatgcagcaacctcagtatcaaccc
caatatccgggtgttgatttagacgaagaaatccaaaaattagaacaagacttaggtatt
tcctacggacaggctcaaaagaaagccattaaagaggcgttaacttccaaaatgtttatc
ttaactgggggaccagggacaggtaagacaacggtattaaacggcatcgtccaattgtat
gctcgtttaaatgatatttccttaaatgtagaagaatacgacccaggtgcctttccaatt
tctttagccgccccaacaggacgagccgctaaacgaatgactgaaatgattcgcctgcca
gcatcaactatccaccgtttacttggtttaacaggtgaagaggatgacagcgaagacggc
gaagtggcaggcatgcagctagaaactgacttgttgattattgacgaaatgtccatggtg
gatacatggcttgcctataaattactttcaagtgtcccttcatttatgcaggtcattttt
gtgggggataaagaccagttagcttctgtaggacccggacaagtattagctgatttattg
tcatcacaaacggttaaaacacgtgaattagatgaaatttaccgtcagaaaaaccagtcg
accattgtccaattggctcatcagattaaacaaggtattgtgcctaaagatttgatgatc
aaccaacgagatcggtcattcttcaaggtgcaagcgaatcaaattgcagacttagtagct
attgtggctaagcgggctgttgacaagggctaccaaaaacgagacgttcaagtcttggcg
ccgctctataaaggacaggccgggatcaatcatatcaatgagcgtttgcaggctgtttta
aaccccaacgacgacggtaaaagacgggagttagtctattttgaacaaacctttagggtt
ggggataaggtcttgcagctgaaaaaccaagccgagaaaaacgttttcaatggcgactta
ggggaaatcgtggctatcttttttgctaaggaaacaactaataaagtagaccaaattgtg
gtgcaatttgatgaggttgaggtgacttatgaacgtaatgacttcaatgaaattacctta
gcttactgtacgtcaattcataagtcgcaggggtcggaatttccaattgtgatagtgcct
ttagtgccgcaacaccaccggatgctgaagcgaaatttattatatacggggattacgcgg
gccaagcagtccttgattatgtgcggtgaaccccaggcctttcaaacggccattcaaaat
gtggatgctagccggcaaacccagctgaaagactttttaatggaagctgtggatattgat
gaacggatggccacggcggttgcagcggaaatagaggacaaagaggaaaatgatgttgac
agcaaagaatctaagagtgaaaattcgacggtaactagcagtcaaatcgaatccaataaa
gacggtgaagaaaaccaagcagaaaatgagtcaactactatcggtagcgatacagaagcg
agtgatgaagctggctcagcagtggcagatttcaaactcactgccgaattggttttgacg
aatgccattgaccctatgataggaatggatggattgaagccggaagatttttaa
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