Avibacterium volantium: NCTC3438_00462
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Entry
NCTC3438_00462 CDS
T06626
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
avt
Avibacterium volantium
Pathway
avt00521
Streptomycin biosynthesis
avt00523
Polyketide sugar unit biosynthesis
avt00541
O-Antigen nucleotide sugar biosynthesis
avt01100
Metabolic pathways
avt01110
Biosynthesis of secondary metabolites
avt01250
Biosynthesis of nucleotide sugars
Module
avt_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NCTC3438_00462 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCTC3438_00462 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCTC3438_00462 (rfbC)
Enzymes [BR:
avt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NCTC3438_00462 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Ppnp
Motif
Other DBs
NCBI-ProteinID:
VEB22464
UniProt:
A0A3S4IBA9
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All DBs
Position
1:complement(469593..470135)
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AA seq
180 aa
AA seq
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MKIIDTTIPDVKILEPQVFGDERGFFMETFRDQWFKENVCNRTFVQENHSKSTKGVLRGL
HYQTENTQGKLVRVISGAVFDVAVDLRKNSPTFGKWVGEILSAENKRQLWVPEGFAHGFY
VLSDEAEFVYKCTDYYNPNAEHSLIWNDPTVGIEWPIIGEPNLSNKDLLGSSLHKAVLFE
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattattgacacaactattcctgatgtaaaaattctagaaccccaagtttttggt
gacgaacgtggtttctttatggagacctttcgcgaccaatggtttaaagaaaatgtgtgc
aatcgaacttttgtacaagaaaaccattcaaaatctactaaaggtgtattaagaggacta
cattatcaaacagaaaacactcaaggaaagctagtaagggtaatttcaggagctgttttt
gatgttgcagtggatctccgtaaaaattcaccaacttttggtaaatgggtaggggaaatt
ttatcagctgaaaataaaagacaattatgggtgcccgaaggatttgcccatggtttttat
gttttaagtgatgaagccgaatttgtgtataagtgtactgactattataatcctaatgcc
gaacactccttgatttggaatgaccctactgtaggtattgaatggcccataattggagag
cctaatttatcaaataaagatttattaggtagctctcttcataaagcagttctatttgag
taa
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