Arthrobacter woluwensis: G8758_01720
Help
Entry
G8758_01720 CDS
T08936
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aww
Arthrobacter woluwensis
Pathway
aww03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aww00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G8758_01720 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aww03400
]
G8758_01720 (mfd)
Enzymes [BR:
aww01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G8758_01720 (mfd)
DNA repair and recombination proteins [BR:
aww03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
G8758_01720 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
MFD_D3
RecG_dom3_C
Gag_p24_C
DUF924
Motif
Other DBs
NCBI-ProteinID:
QTF70870
LinkDB
All DBs
Position
384455..388141
Genome browser
AA seq
1228 aa
AA seq
DB search
MSPRTASATSSQNPAVFQAQLAGIRTVLAEDPAFGNLRVSAAQGTRRSDDFHLGAPSGLN
PVVIAELVDGLKELDSERPDAGAGTSAGTAPAVVLAVTATGREAEDLAAALRAYLPEDEV
AEFPSWETLPHERLSPRSDTVGRRLTVLRRLAHPEAFPTPLRVVVAPVRAVVQPVVAGLG
DLEPVTVRVGAEEPFEDLVRRLAAAAYARVDMVTHRGEFAVRGGILDVFPPTENHPIRIE
FFGDEVEQMRYFAVADQRSLSVGDGVVHPEVLWAPPCRELLITPSVMSRAAKLQKSMPGA
ADMLEKIAGGITVEGMESLAPVLVDSMVPFVSSLPEGSIAFMIEPEKVRLRAHDLIATNE
EFLAAAWSTASDGGAAPLDLGLDPEALLHEASFRTLADTRTDAQSAGVSWWDVSTLGVDE
ELGHDVDVLALRAREPRGYRGDVGEMLEFISSRIKDSWRLVVVTDGPGPAQRLAELFHDA
GVPCARVDRLADAPAPGIIEITTAEAGHGFVLDGLKFGVLTEADLLGRSSARGGTKDMRK
MPSRRRNAVDPLSLHAGDFVVHEQHGIGRFVELVQRKTAGSDGVREYLVLEYAPSKRGAP
GDRLFVPTDQLDQVTRYVGGDTPALSKMGGSDWASTKSKARRAVKEIAGELIRLYSARMA
SKGHAFGQDTPWQRELEQAFPYVETPDQLTTINEVKADMEKEIPMDRLVSGDVGYGKTEI
AVRAAFKAIQDGKQVAVLVPTTLLAQQHHETFSERFSGFPVRVRALSRFQTAKESKETLA
GVKDGSVDLVIGTHRLLSKEIEFKDLGLVIIDEEQRFGVEHKEALKKMRTNVDVLAMSAT
PIPRTLEMSLTGIRETSTLATPPEERHPVLTYVGPYTDKQVSAAVRRELMREGQVFFVHN
RVSSIDRVAASIRELVPEARVEVAHGQMTEARLEQIIVDFWEKRFDVLVCTTIIETGLDI
SNANTLIVDGANNYGLSQLHQLRGRVGRGRERAYAYFLYPSEKPLGEVALERLKAVAAHN
ELGAGMQLAMKDLEIRGAGNLLGGEQSGHIQGVGFDLYIRLVGEAVAEYRGEKEEAAAEM
KIELPINAHLPHDYVPGERLRLEAYRKLAAAHTDAAIDEVRDELVDRYGEPPAPVVNLLD
VARFRVAARAVGLTDVAVQGNFIKFAPAALPESKTMRLSRMYPGSQIKPALNAVLIPKPK
TARVGGRDLADAQVLEWARNVLSAIFED
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctcgcaccgcatccgccacctcctcccagaaccccgccgtgttccaggcacag
ctcgcgggcatccgcaccgtcctggccgaagacccggccttcggaaacctgcgggtgtca
gcggcccagggcacccggcgcagcgacgacttccacctgggtgcgccgagtggcctcaac
cccgtggtgatcgcagagctggtggacgggctcaaggagctggactccgagaggcccgac
gccggcgccggaacctcggcgggaacggcgcccgccgtcgtgctcgccgtgacggcgacg
gggcgcgaggcggaggacctggccgccgccctgcgcgcctatcttcccgaggacgaggtg
gccgagttccccagctgggagacgctgcctcatgagcggctctcgccccgttccgacacg
gtcgggcgccggctgaccgtgctgcgccgcctggcccacccggaggcgttccccaccccg
ctgcgcgtcgtcgtggcgcccgtgcgcgccgtcgtccagccggtcgtggcgggcctcggc
gacctggaacccgtcacggtgcgggtcggcgcggaggagcccttcgaggacctcgtccgc
cggctcgccgccgccgcgtacgcccgcgtggacatggtgacgcaccgcggcgagttcgcc
gtccgcggcggcatcctcgacgtcttcccgcccaccgagaaccaccccatccgcatcgag
ttcttcggcgacgaggtggagcagatgcgctacttcgcggtcgccgaccagcgctccctt
tccgtgggcgacggcgtcgtccaccccgaggtactgtgggccccgccgtgccgcgaactg
ctcatcacgccgtccgtcatgtcccgcgccgccaagctgcagaagagcatgcccggcgcc
gcggacatgctggagaagatcgcgggcgggatcacggtggaaggcatggagtccctggcg
cccgtgctggtcgactccatggtgccgttcgtctcgtccctgcccgaggggtcgatcgcg
ttcatgatcgaaccggagaaggtccggctccgcgcccacgacctcatcgcgaccaacgag
gaattcctcgcggccgcgtggtccaccgcctcggacggcggcgccgcgccgctggacctc
ggcctggacccggaggccctcctgcacgaggccagcttccgcacgctggcggacacccgg
accgacgcgcagtcggcgggcgtctcctggtgggacgtctccaccctgggcgtggacgaa
gagctggggcacgacgtcgacgtgctggcgctgcgggccagggaaccgcgcggataccgc
ggcgatgtgggggagatgctggagttcatctcctcccggatcaaggactcctggcggctc
gtcgtggtcacggacggtccgggtccggcacagcgcctcgccgagctcttccacgacgcc
ggcgtgccctgcgcccgggtggaccgcctggcggacgcgccggctcccggcatcatcgag
atcacgacggcggaggcgggccacggcttcgtcttggacgggctgaagttcggcgtcctg
accgaggccgatctgctcggccgttccagcgcccgtggcggcaccaaggacatgcggaag
atgccgtcccggcgccgcaacgccgtcgacccgctgtccctgcacgcgggcgacttcgtc
gtgcacgaacagcacggcatcggccggttcgtggagctggtgcagcggaagaccgccggc
tcggacggggtgcgcgaatacctggtcctggagtacgccccgtccaagcgcggcgccccc
ggcgaccggctcttcgtccccaccgaccagctggaccaggtcacccgttacgtcggcggt
gacaccccggcgctcagcaagatgggcggctccgactgggcctccaccaagtccaaggcc
cgccgggcggtcaaggagatcgccggcgagctcatccggctgtactcggcccgcatggcg
tccaagggccacgccttcgggcaggacaccccctggcagcgcgaactggaacaggcgttc
ccgtatgtcgagacgccggatcagctgaccaccatcaacgaggtcaaagcggacatggag
aaggagatccccatggaccgcctcgtctccggcgacgtcggctacggcaagaccgagatc
gcggtccgcgccgccttcaaggccatccaggacggcaagcaggtggccgtcctggtgccc
accacgctcctcgcccagcagcaccacgagaccttcagcgagcggttctccgggttcccg
gtccgggtccgggccctgtcccggttccagaccgccaaggagtccaaggagacgctcgcc
ggcgtcaaagacggcagcgtggatctcgtgatcggcacgcaccgcctcctgtcgaaggag
atcgagttcaaggatctgggcctcgtcatcatcgatgaggaacagcggttcggtgtggag
cacaaggaagcgctcaagaagatgcgcaccaacgtggacgtgctggccatgtccgccacc
ccgatcccgcgcaccctcgagatgtccctcaccggcatccgggagacctccaccctggcc
acgccgccggaggagcgccaccccgtgctcacctacgtcggcccgtacacggacaagcag
gtgtccgccgcggtccgccgtgaactcatgcgcgagggccaggtgttcttcgtgcacaac
cgggtgtcctcgatcgaccgggtggccgcgtccatccgcgagctggtcccggaggcacgg
gtcgaggtggcgcacggtcagatgaccgaggcgcgcctggagcagatcatcgtggacttc
tgggagaagcggttcgacgtgctggtctgcaccaccatcatcgagaccggcctggacatc
tccaacgccaacactctgatcgtggacggcgccaacaactatggcctctcgcagctgcac
cagctccgaggccgcgtgggccgtggccgggagcgggcctacgcgtacttcctgtatccg
tcggagaagccgctgggcgaggtggccctggaacgtctcaaggccgtcgccgcgcacaac
gaactcggcgccggcatgcagctcgccatgaaggacctcgagatccgcggcgcgggcaat
cttctgggcggtgagcagtcgggccacatccagggggtgggcttcgacctctacatccgc
ctggtcggcgaagcggtcgcggagtaccgcggggagaaggaggaggcggcggccgagatg
aagatcgagctgccgatcaacgcccacctgccgcacgactacgtgccgggggagcgcctg
cgcctcgaggcctaccgcaagctcgccgcggcccacacggacgcggcgatcgacgaggtg
cgcgacgaactggtggaccgctacggcgagccgcccgcccccgtggtcaacctcctggac
gtggcgcggttccgggtggccgcccgcgcggtcgggctgaccgacgtcgcggtccagggg
aacttcatcaagttcgccccggcggcgctgccggagtccaagaccatgcgcctgagccgc
atgtacccgggctcccagatcaagcccgcgctcaacgcggtgctgatcccgaagccgaag
acggcgcgggtcgggggccgtgatctcgccgacgcgcaggtccttgagtgggcccgcaat
gtcctctcggcgatcttcgaggactag
DBGET
integrated database retrieval system
